LOCUS       NM_001105996             809 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein S18C (Mrps18c),
            mRNA.
ACCESSION   NM_001105996 XM_001067441 XM_214003
VERSION     NM_001105996.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Amunts,A., Brown,A., Toots,J., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Ribosome. The structure of the human mitochondrial ribosome
  JOURNAL   Science 348 (6230), 95-98 (2015)
   PUBMED   25838379
REFERENCE   3  (bases 1 to 809)
  AUTHORS   Cavdar Koc,E., Burkhart,W., Blackburn,K., Moseley,A. and
            Spremulli,L.L.
  TITLE     The small subunit of the mammalian mitochondrial ribosome.
            Identification of the full complement of ribosomal proteins present
  JOURNAL   J Biol Chem 276 (22), 19363-19374 (2001)
   PUBMED   11279123
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474022.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_214003.4, XM_001067441.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BG668934.1, FQ224447.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..809
                     /gene="Mrps18c"
                     /note="mitochondrial ribosomal protein S18C"
                     /db_xref="GeneID:289469"
                     /db_xref="RGD:1307997"
     exon            1..121
                     /gene="Mrps18c"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..462
                     /gene="Mrps18c"
                     /note="28S ribosomal protein S18c, mitochondrial"
                     /codon_start=1
                     /product="small ribosomal subunit protein bS18m"
                     /protein_id="NP_001099466.1"
                     /db_xref="GeneID:289469"
                     /db_xref="RGD:1307997"
                     /translation="MAGLLALRSCIGRKNLTTATGCFTDRATHAVSVPWRRCFSQYEQ
                     VTSNEDLPIPMENPYKEPLKKCVLCEKRVDYKNVQLLSQFISPFTGCIYGRHITGLCG
                     KKQKEVTKAIKRAQKMGFMPVTYKDPAYLKDPKVCNIRYRE"
     exon            122..183
                     /gene="Mrps18c"
                     /inference="alignment:Splign:2.1.0"
     exon            184..267
                     /gene="Mrps18c"
                     /inference="alignment:Splign:2.1.0"
     exon            268..325
                     /gene="Mrps18c"
                     /inference="alignment:Splign:2.1.0"
     exon            326..385
                     /gene="Mrps18c"
                     /inference="alignment:Splign:2.1.0"
     exon            386..809
                     /gene="Mrps18c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacggaaagg aagaggaagg gcagagaacc atggcaggtc tgcttgctct gcgcagctgt
       61 atagggagga agaacttgac aaccgcgact ggctgcttca cggatcgcgc aactcacgcg
      121 gtttctgtgc catggagaag atgtttttca cagtatgaac aggtaaccag caatgaagac
      181 ctgccaatcc caatggaaaa cccctataaa gagcctctta agaagtgcgt cttgtgtgag
      241 aaacgtgtag attacaagaa tgtacagctt ttgtcccagt ttatttctcc atttaccgga
      301 tgcatttacg gaaggcacat aacaggtctt tgtgggaaga agcagaagga agtgactaaa
      361 gccattaagc gagctcagaa aatggggttt atgccagtta catacaagga tccggcatat
      421 ctcaaagacc ctaaagtttg caacatcaga taccgagaat aaattttgta aagttcctgc
      481 caataagcct gggagtgctc ttgtcagcag actcggctca tctgagtaga cgtgtctttc
      541 tgtgggttag gatgaattag tccaccccaa tgaatgcgct aggcagtgct tctgatggta
      601 atggatactg tacactttgg taaagtgatt cctcagggtt gtcacaactt atagtacaga
      661 ttatggaagg agagggcttc tattagaatc ccaacccaga gcagattctg ttcttatgat
      721 gggatggttt taggggaatg gttctagaaa gtcagagtgt ttgtttgaat cccacgttaa
      781 cggctgtggc attaaatttg cttggagtc
//
