LOCUS       NM_212534               1064 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein S18B (Mrps18b),
            mRNA.
ACCESSION   NM_212534 XM_215297
VERSION     NM_212534.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Greber,B.J., Bieri,P., Leibundgut,M., Leitner,A., Aebersold,R.,
            Boehringer,D. and Ban,N.
  TITLE     Ribosome. The complete structure of the 55S mammalian mitochondrial
            ribosome
  JOURNAL   Science 348 (6232), 303-308 (2015)
   PUBMED   25837512
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Amunts,A., Brown,A., Toots,J., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Ribosome. The structure of the human mitochondrial ribosome
  JOURNAL   Science 348 (6230), 95-98 (2015)
   PUBMED   25838379
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM036709.1, BC166875.1 and AA946550.1.
            
            On Oct 16, 2009 this sequence version replaced NM_212534.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166875.1, FQ215273.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-18                FM036709.1         1-18
            19-1062             BC166875.1         1-1044
            1063-1064           AA946550.1         1-2                 c
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1064
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /note="mitochondrial ribosomal protein S18B"
                     /db_xref="GeneID:294230"
                     /db_xref="RGD:1302998"
     exon            1..103
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..793
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /note="28S ribosomal protein S18b, mitochondrial"
                     /codon_start=1
                     /product="small ribosomal subunit protein mS40"
                     /protein_id="NP_997699.2"
                     /db_xref="GeneID:294230"
                     /db_xref="RGD:1302998"
                     /translation="MCDKMAASLRHTLLRLYPSLLRSSYVAQVPLQTLCTRSPPEDAS
                     SSLPVSPFENEPWKYLDSEEYQNRYGSRPVWADYRRNHKGGVPPQRTRKTCIRKDKVA
                     GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARE
                     YGLLSYYVPQVEPRDADLRTVHGAVSVTPPAPTLLSGEPWYPWYSWQQPPERELSRLR
                     RLYQGNLLEASGPPPESMPEMPSTAPAEASTEQTGSQSA"
     exon            104..209
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /inference="alignment:Splign:2.1.0"
     exon            210..307
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /inference="alignment:Splign:2.1.0"
     exon            308..376
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /inference="alignment:Splign:2.1.0"
     exon            377..443
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /inference="alignment:Splign:2.1.0"
     exon            444..503
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /inference="alignment:Splign:2.1.0"
     exon            504..1064
                     /gene="Mrps18b"
                     /gene_synonym="Ptd017"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccggcaggcc gtacgttgga tgtgcgacaa gatggctgcc tccttgcggc acacgctgct
       61 aaggctgtat ccttcactct tacgaagttc ctatgtagct caggttcccc tccagactct
      121 ctgcaccaga agcccacctg aagatgcttc atcctcactt cccgtctccc cttttgagaa
      181 cgaaccttgg aaatacctgg attcagaaga ataccagaac cgctatggct ctcgccctgt
      241 ttgggctgac taccgccgca accacaaagg tggtgtgcca ccacagcgga cccgaaagac
      301 atgcattcgt aaggataaag tggctgggaa tccttgcccc atctgccggg atcacaagtt
      361 gcatgttgac tttaggaatg tgaaactctt ggaacagttt gtttgtgccc acacgggtat
      421 catcttccat gccccatata caggggtctg tatgaagcag cacaagaagc tgacccaggc
      481 catccagaaa gccagggagt atggtcttct cagttactac gttccccagg ttgagccccg
      541 agatgctgac cttcgcactg tacatggagc tgtcagtgtg actccaccag cccccacgtt
      601 gttgtcgggt gaaccttggt acccgtggta cagctggcaa cagccaccag agagagagct
      661 ctctcgcctt cgccggctct atcaaggaaa tctcctggaa gcaagtggcc ccccacctga
      721 gtcaatgcct gagatgccct ctacagcacc agcagaagcc tccactgagc agaccggatc
      781 ccagagtgct tagaactcga gactgcggaa gtcagactta gggagtggtg tctaggggta
      841 tgtggtggtg tgtgttctgg aaagggttct gttttgtgac agtggcagac cctaaaagga
      901 aatgactgct atgaagagga caagcacatt tgaagttgag atgtatgtgg gtaactctgg
      961 agagggctta catatgaact ggagactttg tgtgcgcttg tacgtcccta ttttaaacct
     1021 cctggcccgg cttttagaca ataaagctgt gtctcctcac ctgt
//
