LOCUS       XM_006249264             869 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitochondrial ribosomal protein S17
            (Mrps17), transcript variant X1, mRNA.
ACCESSION   XM_006249264
VERSION     XM_006249264.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006249264.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006249264.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..869
                     /gene="Mrps17"
                     /note="mitochondrial ribosomal protein S17; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 42 ESTs, 92 long SRA reads, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 242 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:288621"
                     /db_xref="RGD:1307650"
     CDS             116..499
                     /gene="Mrps17"
                     /codon_start=1
                     /product="28S ribosomal protein S17, mitochondrial isoform
                     X1"
                     /protein_id="XP_006249326.1"
                     /db_xref="GeneID:288621"
                     /db_xref="RGD:1307650"
                     /translation="MSIVRSAVHAKWVVGKVIGTAMVKTAKVRATRLVLDPYLLKYFN
                     KRKTYFAHDALQQCSVGDIVLLRALPVPRAKHVKHELAEIIFKVGRVIDPVTGKPCAG
                     TAYLESPLSSEATPPCESREELKSS"
ORIGIN      
        1 gcgcctggga aaagggaggg gtggggctag cgcaccatgt gcgtcatcat gctgcgccca
       61 ggctcctccg gccttggtcc gagttgtagg ttttggaggc gctcacagac acataatgtc
      121 aatagtccgt tcagccgtcc acgccaaatg ggttgtgggg aaggtgattg gtacagcaat
      181 ggtaaaaact gctaaagtaa gagcgaccag acttgttttg gatccctact tactaaagta
      241 ctttaataag cggaaaacct actttgctca tgacgccctt cagcagtgca gcgtcgggga
      301 catcgtgctc ctcagagctc tgcccgtccc acgagcaaag cacgtgaaac acgaactggc
      361 agagatcatc ttcaaagtgg gccgagttat cgaccccgtc acaggaaagc cctgtgcagg
      421 aaccgcctac ctggagagcc ccctcagttc agaagccact cccccctgcg aatctcgaga
      481 agagctcaag tcctcctgaa cctggggaag agggagccag aggatggatg tctgtctgtt
      541 tgctcagtgg cttttcatac tgtttctcct gtgacattag aagtattcaa cagagtaaag
      601 agcttagcgt tccataaagg ttcgcatcct ttttcagatt ctctgccctg aagttacctt
      661 ccgagtactc tgtatgccta agcgtgctgc gtcattccgt aagctcactg tcctagatca
      721 tatatgtatt gttttgtttg ccatcactca aagaaatctt ggactttgca cctttatttt
      781 aaaagaagaa aaccttttga taataacaga aaaggctaaa cttagtttcg atagctgaat
      841 ttttcaaaat atatcgtgtg tgtccacaa
//
