LOCUS       XM_006244465            1316 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitochondrial ribosomal protein S10
            (Mrps10), transcript variant X1, mRNA.
ACCESSION   XM_006244465
VERSION     XM_006244465.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006244465.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006244465.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1316
                     /gene="Mrps10"
                     /gene_synonym="Ac1179"
                     /note="mitochondrial ribosomal protein S10; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 3 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 212 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:363187"
                     /db_xref="RGD:1311516"
     CDS             51..653
                     /gene="Mrps10"
                     /gene_synonym="Ac1179"
                     /codon_start=1
                     /product="28S ribosomal protein S10, mitochondrial isoform
                     X1"
                     /protein_id="XP_006244527.1"
                     /db_xref="GeneID:363187"
                     /db_xref="RGD:1311516"
                     /translation="MAARAACVAVCRRLQQELGNSSINGARSSTIRTRGLLFARMKWV
                     PLSNLHMDVPKDLVRPTITTSDEPDTLYKRLSILVKAHDKAVLDSYEYFAVLAAKELG
                     LSIKVHEPPRKIERFTLLKSVHIFKKHRVQYEMRTLYRCLELKHLTGCTANVYLEYIQ
                     RNLPEGVAMEVTKTQIQQLPEHIKEPMWETVSGEKEETKS"
ORIGIN      
        1 agggcacggc tgtgatcccg gaagcgatcg tgggaggtca gggcaccaag atggcggcgc
       61 gcgcagcgtg tgtggctgtc tgccggcgcc tgcagcagga attggggaat tcatctataa
      121 atggtgctag gagcagtaca atcagaactc gaggcctcct gtttgccagg atgaagtggg
      181 taccattgtc aaatctgcac atggatgtcc caaaggatct ggtcagacct acgataacca
      241 cttctgatga gccagacacg ttgtacaaac gcctgtccat tttagtgaaa gcccatgaca
      301 aggctgtatt agacagttat gagtattttg ccgtgctcgc tgctaaagaa cttggccttt
      361 ctattaaagt acacgagcca cccaggaaaa tagagcgctt cactctcctc aagtcagtgc
      421 acatcttcaa gaagcacaga gtccagtatg agatgaggac gctctacaga tgtctggagt
      481 taaaacattt gaccggatgc acagccaatg tctacctgga atacatccag cgaaacctac
      541 ctgaaggggt ggccatggaa gtgacaaaga cacagataca gcagttgcca gagcacatca
      601 aggagccaat gtgggaaaca gtttccgggg agaaagaaga aaccaaatca taaacctcag
      661 acagcagctg tgcggggacc tgaactgagc agacctgtgt gtcccacaga gaggccccgg
      721 caaggggagc cagggcccct gcccttgctc tgttgggtcc tcagcagggc agccaggtgt
      781 gggtctgggg aagaaccact gtatctgttc tttttttttt tttttttttt ttttttaaag
      841 acttatttgt ttgtttattt attataagta cactgtagct gttttcagac acagatgcag
      901 agtgcatcag atctcattac ggatggttgt gagccaccat gtggttgctg ggatttgaac
      961 tcaggacctc tggaaaagca gtcagtgctc ctaaccactg agccatctct ccagcccgta
     1021 tctgttcttt ataccaggct atgcctgtgt tctgatttga acaaacatta gcaaacttcg
     1081 gtatgacccg aaacaaaaga accagattta aaccctgtgt agcactgcca acttcttgtt
     1141 agcttgcgct aattttattt tattttgttt ttatttattt atacattcat tccttcattt
     1201 ttatttctgg aactcaaaga gatctacctg cctccccctc ccagatgctg gattaaagct
     1261 gtgtctacca tgcatggctg gtttgtggta attttaaatg tttacttgtt cattca
//
