LOCUS       NM_001191656             828 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L58 (Mrpl58),
            mRNA.
ACCESSION   NM_001191656 XM_221110
VERSION     NM_001191656.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Richter,R., Rorbach,J., Pajak,A., Smith,P.M., Wessels,H.J.,
            Huynen,M.A., Smeitink,J.A., Lightowlers,R.N. and
            Chrzanowska-Lightowlers,Z.M.
  TITLE     A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into
            the human mitochondrial ribosome
  JOURNAL   EMBO J 29 (6), 1116-1125 (2010)
   PUBMED   20186120
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jul 17, 2010 this sequence version replaced XM_221110.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BQ205093.1, CB579155.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-191               JAXUCZ010000010.1  101145342-101145532
            192-228             JAXUCZ010000010.1  101147967-101148003
            229-288             JAXUCZ010000010.1  101150396-101150455
            289-371             JAXUCZ010000010.1  101150973-101151055
            372-541             JAXUCZ010000010.1  101151143-101151312
            542-828             JAXUCZ010000010.1  101151552-101151838
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..828
                     /gene="Mrpl58"
                     /gene_synonym="Ict1"
                     /note="mitochondrial ribosomal protein L58"
                     /db_xref="GeneID:303673"
                     /db_xref="RGD:1307942"
     exon            1..191
                     /gene="Mrpl58"
                     /gene_synonym="Ict1"
                     /inference="alignment:Splign:2.1.0"
     CDS             6..626
                     /gene="Mrpl58"
                     /gene_synonym="Ict1"
                     /EC_number="3.1.1.29"
                     /note="peptidyl-tRNA hydrolase ICT1, mitochondrial;
                     immature colon carcinoma transcript 1; large ribosomal
                     subunit protein mL62"
                     /codon_start=1
                     /product="large ribosomal subunit protein mL62 precursor"
                     /protein_id="NP_001178585.1"
                     /db_xref="GeneID:303673"
                     /db_xref="RGD:1307942"
                     /translation="MAAAWGLRWSLSRAGTLLLPPLARCARRTLHRQVNGTEFKSIYS
                     LDKLYPESKGVDTAWKVPEHAEQASSDIPLDRLSISYCRSSGPGGQNVNKVNSKAEVR
                     FHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAK
                     ASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD"
     exon            192..228
                     /gene="Mrpl58"
                     /gene_synonym="Ict1"
                     /inference="alignment:Splign:2.1.0"
     exon            229..288
                     /gene="Mrpl58"
                     /gene_synonym="Ict1"
                     /inference="alignment:Splign:2.1.0"
     exon            289..371
                     /gene="Mrpl58"
                     /gene_synonym="Ict1"
                     /inference="alignment:Splign:2.1.0"
     exon            372..541
                     /gene="Mrpl58"
                     /gene_synonym="Ict1"
                     /inference="alignment:Splign:2.1.0"
     exon            542..828
                     /gene="Mrpl58"
                     /gene_synonym="Ict1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaacatggc ggccgcctgg ggcctacgct ggagcctgag ccgagctgga accttgttgc
       61 tcccgccgct cgcgcgctgt gctcgccgga ctctgcacag acaggtgaac ggcaccgagt
      121 tcaagagcat ctacagcctg gacaagctgt accccgaatc caagggcgtg gataccgcct
      181 ggaaggtccc ggagcatgca gaacaagcca gcagtgacat ccctctagat cggttgagca
      241 tatcttactg tcggagcagc ggtcctggag ggcagaacgt taacaaagtg aattccaagg
      301 ccgaagtaag gtttcacttg gccagtgcag actggattgc ggagcctgta cgccagaaga
      361 ttgccctcac gcataaaaat aagatcaaca aggcaggaga gctggtactt acctccgaga
      421 gcagccgata ccagttccgc aatctggcag aatgcctaca gaaaattcga gacatgattg
      481 ccaaggccag ccaggtgccc aaggagccat ccaaagaaga tgctcagctt cagagactca
      541 ggattgagaa gatgaaccga gaaaggctac gacagaaaag aataaactcg accataaaga
      601 caagcaggag gatgactatg gactgaagtc accccaccct gctgacaaag gccagagtgt
      661 cagtgcagct cagcagagag cagacacacc acaggaacct ttccttgatt ctttggagtg
      721 gtgtcagaag gttcctttgg agggaaggct gcaggtcatc cagggcagct ccctccctct
      781 gttatccacc tcatgagtta ctgtgacaat aaacttctaa gcacagga
//
