LOCUS       NM_001106770             611 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L54 (Mrpl54),
            mRNA.
ACCESSION   NM_001106770 XM_001075791 XM_216854
VERSION     NM_001106770.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Amunts,A., Brown,A., Toots,J., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Ribosome. The structure of the human mitochondrial ribosome
  JOURNAL   Science 348 (6230), 95-98 (2015)
   PUBMED   25838379
REFERENCE   3  (bases 1 to 611)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474029.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_216854.3, XM_001075791.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ224331.1, FQ211295.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..611
                     /gene="Mrpl54"
                     /note="mitochondrial ribosomal protein L54"
                     /db_xref="GeneID:299628"
                     /db_xref="RGD:1305694"
     exon            1..159
                     /gene="Mrpl54"
                     /inference="alignment:Splign:2.1.0"
     CDS             42..449
                     /gene="Mrpl54"
                     /note="39S ribosomal protein L54, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein mL54"
                     /protein_id="NP_001100240.1"
                     /db_xref="GeneID:299628"
                     /db_xref="RGD:1305694"
                     /translation="MAAASLLGATRVWARWHPRALPVPGRPGELFIREYAKKAVSKGG
                     KGGVAAEALKDPEVCTDPSQLTTHAMGVNIYKEGQEVALKPDSEYPTWLFQVDLGPPK
                     KLEDLEPESREYWRLLRKQNIWRHNRLSKNKKL"
     exon            160..316
                     /gene="Mrpl54"
                     /inference="alignment:Splign:2.1.0"
     exon            317..611
                     /gene="Mrpl54"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtaacacgga agcatgcacg tgtgagcggc cggcgagcgt catggcggcc gccagtctcc
       61 tcggggcaac ccgggtgtgg gcccgctggc atccccgggc gctcccggtc cccgggagac
      121 ctggagaatt atttatccgg gaatatgcca agaaggcagt cagcaagggt ggcaagggtg
      181 gcgtggccgc tgaggccctg aaggaccccg aggtgtgcac agacccctct cagctcacca
      241 cacacgccat gggggtcaac atctacaagg aaggccagga ggtggccctg aagccagact
      301 ctgagtaccc gacatggctg ttccaggtgg acctgggtcc ccccaaaaag ctagaggacc
      361 tagaaccgga gtcccgagag tactggcgac tgcttcgcaa acagaacatc tggcgtcaca
      421 acaggctgag caagaacaag aagctgtaat gtgagtgtgg gcacttcctc ccaggagcca
      481 gcctggtgcc agccagaacg gggagaaccg agtccttcat tcgctcaccg tgatgtgcag
      541 gccttacaca cactaaataa acaaagatga aaatgaaggg caaaataaag ggacctgcgg
      601 cagtcacgcc c
//
