LOCUS       NM_001047883            1700 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L49 (Mrpl49),
            mRNA.
ACCESSION   NM_001047883 XM_001071219 XM_219525
VERSION     NM_001047883.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   3  (bases 1 to 1700)
  AUTHORS   Haque,M.E., Elmore,K.B., Tripathy,A., Koc,H., Koc,E.C. and
            Spremulli,L.L.
  TITLE     Properties of the C-terminal tail of human mitochondrial inner
            membrane protein Oxa1L and its interactions with mammalian
            mitochondrial ribosomes
  JOURNAL   J Biol Chem 285 (36), 28353-28362 (2010)
   PUBMED   20601428
REFERENCE   4  (bases 1 to 1700)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1 and FM121128.1.
            
            On Nov 30, 2020 this sequence version replaced NM_001047883.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ235268.1, FQ212546.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840111, SAMN16676788
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-18                JAXUCZ010000001.1  212779310-212779327 c
            19-581              FM121128.1         15-577
            582-1700            JAXUCZ010000001.1  212775357-212776475 c
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1700
                     /gene="Mrpl49"
                     /gene_synonym="Aa2-277"
                     /note="mitochondrial ribosomal protein L49"
                     /db_xref="GeneID:309176"
                     /db_xref="RGD:1309920"
     exon            1..97
                     /gene="Mrpl49"
                     /gene_synonym="Aa2-277"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..520
                     /gene="Mrpl49"
                     /gene_synonym="Aa2-277"
                     /note="39S ribosomal protein L49, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein mL49"
                     /protein_id="NP_001041348.1"
                     /db_xref="GeneID:309176"
                     /db_xref="RGD:1309920"
                     /translation="MAANVFRVILHDWKTCVRWSYGRRQLSQTQGPPDNPSFVESVDE
                     YQFVERLLPPTKIPEPPKHKHYPTPSGWQPPRDPLPSLPYFVRRSRMHNIPVYKEITH
                     GNRQMTLIRKVEGDIWALQKDVEEFLSPLLGKTPVTQVNEVTGTLRIKGYFDEQLKAW
                     LLEKGF"
     exon            98..248
                     /gene="Mrpl49"
                     /gene_synonym="Aa2-277"
                     /inference="alignment:Splign:2.1.0"
     exon            249..373
                     /gene="Mrpl49"
                     /gene_synonym="Aa2-277"
                     /inference="alignment:Splign:2.1.0"
     exon            374..1700
                     /gene="Mrpl49"
                     /gene_synonym="Aa2-277"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actcattgga ggagcaaaga tggcagcaaa tgtattccga gtcattctcc atgactggaa
       61 gacttgcgtg cggtggagct acgggcgacg gcagctgagc cagacccagg ggcctcctga
      121 taaccccagc tttgtggaat ctgtggatga ataccagttt gtggagcgcc tgctcccccc
      181 taccaaaatc ccagagccac caaaacataa acattatccc actcctagtg gttggcagcc
      241 tcccagagat ccccttccca gcttgcccta ctttgttcgt cgctctcgga tgcacaacat
      301 ccctgtctat aaggagatca cacatggcaa ccgacagatg accttaattc gcaaggtaga
      361 aggtgacatc tgggctctac agaaggatgt ggaagaattt ttgagcccat tgctgggaaa
      421 gacgcctgtc acccaggtta atgaggtgac aggtactctt cgaatcaagg gctactttga
      481 tgagcaactt aaagcctggc ttcttgagaa aggcttctga ggcctgatgg tcagcccatg
      541 tggcagtgct ctccacagac tggcatccag agaggaagtg gacttggaat ctctggaatg
      601 ggacacaaag aacagaattt attcttagga tgaaagggct ttgagataag gccttgcttt
      661 cgtcaagggg gagtagaccg gtatgtatag gtatccactt gaaagctgtc caacacagga
      721 ggccacagca accatcaggc taacaaggca gacatgactg ctgtacagac aatctcttgt
      781 gcattctgtg gaagcatcac ctgtcaataa aaagctaatg gccagtgagc tagaggcagg
      841 attagattgt gggaaattgg acagggaact ctagatggga agcaagatgt atgaaactga
      901 aaggtaacta accagccatg tggcagacat agaatagttt taatgggtta aatgagttgt
      961 gaactagtgg gaacaagcct tgtttaaggc ctaacaatga gcccgtcagt cataattcag
     1021 gaactaagac accagtggaa aagcctgaga ttacaaactg ccgtgccttt ataaactggc
     1081 acacatttct ttatgtcagc cattctggaa gcagccaccc aaccctgttc tgggggcttc
     1141 acagggtaga cccctcagag aatccatcct tggcctggag cttttgctat agatggggca
     1201 tggtggaggc tatggagaac agatgacaca gtgcaggaca atgacgtgga ctggagtgga
     1261 tgagacagac aaaatgtctt aggtactaag tgctgtacta ggtagggttg gggaatcacc
     1321 ctgtgacctg gaatcaacta tgtaagtgtt tgaagacaaa atgcagacct tccacttctg
     1381 gcactccccc cacaagtcat atgtctaacc caccattaaa ctggataaac aatgttaaac
     1441 agtgttcata catagtgcct ggctaccctg tctgacctca gacctaaggt agagaggtac
     1501 caacctccca gtgctctcta gttgaatgat ttcagcatcc taatcccaga aaccgcaggc
     1561 tattcctaag tctatagact gagcaagtaa aaggagctca gccctgatcc taggtgacaa
     1621 gttccaccag tcattaatgc aaggttttat ttagctgtat atacaattta agctattaaa
     1681 atttatacaa tatttacaaa
//
