LOCUS       NM_001105834            2205 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L45 (Mrpl45),
            mRNA.
ACCESSION   NM_001105834 XM_001081368 XM_213446
VERSION     NM_001105834.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Xue,Y., Guo,Y., Luo,S., Zhou,W., Xiang,J., Zhu,Y., Xiang,Z. and
            Shen,J.
  TITLE     Aberrantly Methylated-Differentially Expressed Genes Identify Novel
            Atherosclerosis Risk Subtypes
  JOURNAL   Front Genet 11, 569572 (2020)
   PUBMED   33381146
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   3  (bases 1 to 2205)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   4  (bases 1 to 2205)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   5  (bases 1 to 2205)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_213446.4, XM_001081368.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EV767272.1, SRR8487226.161723.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..2205
                     /gene="Mrpl45"
                     /note="mitochondrial ribosomal protein L45"
                     /db_xref="GeneID:287656"
                     /db_xref="RGD:1304913"
     exon            1..113
                     /gene="Mrpl45"
                     /inference="alignment:Splign:2.1.0"
     CDS             48..968
                     /gene="Mrpl45"
                     /note="39S ribosomal protein L45, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein mL45"
                     /protein_id="NP_001099304.1"
                     /db_xref="GeneID:287656"
                     /db_xref="RGD:1304913"
                     /translation="MAAPIPRGLSSLSRTLGWWSRQPILVTRSTAVVPVKSKSRFRPP
                     TREPNYKTEKEFLEYARKAGLVIPQERLERPIHLACTAGIFDPYVPPEGDARMSSLSK
                     EGLTQRTERLRKNVASQLAIRKIKEFDANFKTKDFPEKAKDIFIEAHLCLNNSDHDRL
                     HTLVTEHCFPDMVWELKYKTVRWSFVESLEPAQVVHVRSSGLVNQSNMYGQVTVRLHT
                     RQTLAIYDRFGRLMYGQEDVPKDVLEYVVFERHLMNPYGSWRMHAKIVPPWAPPKQPI
                     LKTLMIPGPQLKPWEEYEETQGEAHKPQLT"
     exon            114..291
                     /gene="Mrpl45"
                     /inference="alignment:Splign:2.1.0"
     exon            292..409
                     /gene="Mrpl45"
                     /inference="alignment:Splign:2.1.0"
     exon            410..508
                     /gene="Mrpl45"
                     /inference="alignment:Splign:2.1.0"
     exon            509..557
                     /gene="Mrpl45"
                     /inference="alignment:Splign:2.1.0"
     exon            558..707
                     /gene="Mrpl45"
                     /inference="alignment:Splign:2.1.0"
     exon            708..881
                     /gene="Mrpl45"
                     /inference="alignment:Splign:2.1.0"
     exon            882..2205
                     /gene="Mrpl45"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgatctgcg gctcgactga catcccggcg gcctttgcgt gagcaaaatg gcagccccca
       61 tacctcgggg cttgtcctcc ttatccagga ctttgggatg gtggtcacgg cagcccattc
      121 tggtgactcg gtccacagct gtagttccag taaaatccaa aagccgtttc agaccaccga
      181 ctcgtgaacc caactacaaa acagaaaagg agtttttgga atatgccagg aaagcaggat
      241 tggttattcc acaggaacgt ttggaacgtc ctatacattt ggcctgtaca gctggtatat
      301 ttgatcccta tgttccgccg gagggggatg ctcgaatgtc atctctttca aaggaaggac
      361 taacacagag aactgagcga ttaagaaaga atgtggcatc acagttggca attcgaaaga
      421 taaaggaatt tgacgctaat tttaaaacaa aagacttccc tgaaaaagct aaggatattt
      481 ttatcgaagc tcacctttgt ctaaacaact cagaccatga ccggcttcat accttggtaa
      541 ctgagcactg ttttccagac atggtctggg agctcaagta caagactgtg cgctggagct
      601 ttgtggagtc tctagagccg gcccaagtgg ttcatgtccg ttcttcaggt ctggtgaacc
      661 agagcaacat gtacggccag gtcaccgtgc gcctgcacac tcggcagacg ttggccattt
      721 atgatcggtt tggcagattg atgtatgggc aggaagatgt gcccaaggac gtcctggaat
      781 atgtggtgtt tgaaaggcac ttgatgaacc cgtatgggag ctggagaatg catgccaaga
      841 ttgtgccccc gtgggcaccc cctaagcaac caattctcaa gaccttgatg attcctggtc
      901 ctcagctgaa accgtgggag gagtacgaag agacacaagg ggaggcccat aagcctcaac
      961 taacctgatg gcatgaatga ctcctgggga gcctggcaga ggtggcgcac acctttaatc
     1021 ccagcactcg gaagacagag gcaggtggat ctctgtgagt tcaagggcag cctggtctac
     1081 agaacaagtt gcagggcagc ctgcgctaca cagagaaccc tgtctcagaa aaaaacaaaa
     1141 gaaaaaaatt taaaaaagac ttctgagagg tgctcagggg gtggggctgc aaactcacct
     1201 cctcctggaa ggcttcccct gcctcccctg ccctgcctgg gtcagcaacc ccaacccctt
     1261 tcagtcatgg ctgatgtgtg gcccaggtgg gcgctgggca gccatgcagc agcatctttt
     1321 tacagccatg tttagcttct gaggggaaat gagaagcatc aggagggaga gcagatgtgg
     1381 cactgggctt tccctgcagg cactgtggga tcagacaaca gcttgctttt ttctaaccat
     1441 aggccaggtc agcatttgga ataaaatact gtcaaagagt tgaataaact gtgcgtcctg
     1501 tgcatttccc ctggttcaga ctgggaacgg ggcagttctg tgacgtctgt caggcgtggg
     1561 aagtgtctgt caggcatgta gttatgagtg atgtggcttc caggaactct agacaggaag
     1621 aattccaagt gtctacaaac tagagcatcc tgcttcagtc ccgccactca ggaagttggg
     1681 ggaaggggaa gatcagaagc ttaatatcat ccttggctac acacaattca aagtcagtct
     1741 gggccaccta gattctgtct caaatgaaca gcaacaaaaa tagggtgcta cttaatttta
     1801 tatgcatgag tgttctgtct gcatgtatgt gagtgttctg tctgcatgta tatgagtgtt
     1861 ctgtctgcat gtatatgagt gttctgtctg catgtatata ctacatgcat ggctggtgtc
     1921 cttggaggtc caaagagggt gtcagatccc ctggaacttg agttatgtat ggttgtgaac
     1981 caccaagtag gtgctaggaa ctggatctgt gtcttctgca agagcaacag gtattctttt
     2041 ttcttttttt aagatttatt taatgtccgt gagtacactc tcactgtttt caaacacacc
     2101 agaagagggt cccattgtgg ttgtgagcca tcatgtggtt gccgggaatt attgttttag
     2161 gacctgtgga agagcagcca atgctcttaa ccactgagcc atctc
//
