LOCUS       NM_001399464            1233 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L43 (Mrpl43),
            mRNA.
ACCESSION   NM_001399464 XM_008760428
VERSION     NM_001399464.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   3  (bases 1 to 1233)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000054.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001399464.2.
            
            On Jan 7, 2022 this sequence version replaced XM_008760428.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM060146.1, CK225915.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132299, SAMEA5756307
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-158               JACYVU010000054.1  4962169-4962326     c
            159-265             JACYVU010000054.1  4961969-4962075     c
            266-1233            JACYVU010000054.1  4960889-4961856     c
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q54"
     gene            1..1233
                     /gene="Mrpl43"
                     /note="mitochondrial ribosomal protein L43"
                     /db_xref="GeneID:309440"
                     /db_xref="RGD:1307593"
     exon            1..158
                     /gene="Mrpl43"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..498
                     /gene="Mrpl43"
                     /note="39S ribosomal protein L43, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein mL43"
                     /protein_id="NP_001386393.1"
                     /db_xref="GeneID:309440"
                     /db_xref="RGD:1307593"
                     /translation="MTARGTPSRFLTSVLHNGLGRYVQQLQRLSLTLSRDAPSSRGAR
                     EFVEREVTDFARRNPGVVIYLNPRPCAVPRIVAEYLNGAVREENVNSKSVEEITSLVQ
                     KLADQSGLDVIRIRKPFHTDNPSIQGQWHPFTNKRTTFHGLRPRELQDSAPASI"
     exon            159..265
                     /gene="Mrpl43"
                     /inference="alignment:Splign:2.1.0"
     exon            266..1233
                     /gene="Mrpl43"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctctcctg gctgtctggc ggtagccatg accgcgcgcg gtactccaag ccgctttctg
       61 accagcgtcc tccataatgg gctaggtcgc tacgtgcagc agctgcagcg tctcagcctc
      121 accctcagtc gggatgcgcc ctcgtcccgc ggcgccaggg agttcgtgga acgcgaagtg
      181 acggacttcg cccgacggaa cccaggagtc gtaatatact tgaaccctcg cccgtgcgct
      241 gtgccgagaa tagtggccga ataccttaac ggggctgtgc gcgaggaaaa tgtcaacagc
      301 aagtcggtgg aggagatcac atcgctggtg cagaagctgg cagaccagtc cggcttggat
      361 gtgatccgca tccgcaagcc cttccacacg gacaacccta gcatccaggg ccagtggcac
      421 cccttcacca acaaacggac taccttccac gggctgcggc ccagagaact ccaggattct
      481 gctccagctt caatatgagc acagtagaga accaggcttt ggacaggccg agtaggtgga
      541 gcctaccagc gggggagtgt cctggaataa agaagagttc cggggttggg gatttagctc
      601 agtggtagag ctgggttcgg tcctcagctc cggggcgggg gggggggggg gggggggggg
      661 gggggaagaa aagaaaagaa gagttccatt gcccacgtct acccaggttt agtgaccttg
      721 gggataccct aattctgatt catgtggcct ccttgcaaac tgagatgtga gaagtgtaca
      781 acacttcagg accttgtttt ctgaaatata atgatttcaa aacacagtga agggttgaag
      841 gctgtcttct gaaggacatg ggatgtcctg ttgcccttac tatagtatgg cattgggcaa
      901 agcacctcat atccgtgttt gtgtgcagtt tgggaaaccg aagtcgagcc tggcattggt
      961 ggtgccaaca tttggttggc agagacaggt aaatctctaa gttcaaggcc agcttggtct
     1021 acagagtgag ttccaggaca accagagcta cacagaaaaa ccctgtttca aagaagaaaa
     1081 agaaaggaaa ccaaagtcat ttgttgttgt aaaaacataa aaaataaaaa aaaagtatgg
     1141 ctgtctttta cctcacttgg tccaaaaaac cctgtctcaa agaagaaaaa gaaagaaagg
     1201 aagccgaagt cattaaactc acctaagacc ata
//
