LOCUS       NM_001009369            1374 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L38 (Mrpl38),
            mRNA.
ACCESSION   NM_001009369 XM_221126
VERSION     NM_001009369.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CO567099.1 and BC087096.1.
            
            On Sep 27, 2011 this sequence version replaced NM_001009369.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087096.1, SRR8487226.218316.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3                 CO567099.1         1-3
            4-1374              BC087096.1         1-1371
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..1374
                     /gene="Mrpl38"
                     /note="mitochondrial ribosomal protein L38"
                     /db_xref="GeneID:303685"
                     /db_xref="RGD:1311180"
     exon            1..81
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
     CDS             15..1157
                     /gene="Mrpl38"
                     /note="39S ribosomal protein L38, mitochondrial; L38mt;
                     MRP-L38"
                     /codon_start=1
                     /product="large ribosomal subunit protein mL38"
                     /protein_id="NP_001009369.2"
                     /db_xref="GeneID:303685"
                     /db_xref="RGD:1311180"
                     /translation="MAAPWWRAAFSVTGRCRGISTSASLSRRTPPLGPMPNEDIDVSN
                     LERLEKYRSFERYRRRAEQEAHAPHWWRTYREYFLKETDPKDRINIGLPPPRVSRTQK
                     LQERKRFLQELRANSEEERAARLRTASIPLEAVRAEWERTCGPYHKQRLAEYYGLYRD
                     LFHGATFVPWVPLHVAYALGEEDLIPVYHGNEVTPTEASQAPEVTYEADKDSLWTLLF
                     INLDGHLLEPDAEYLHWLVTNIPSNRVAEGQESCPYLPPFPARGSGFHRFAFLLFKQD
                     KPINFSEDTRPSPCYQLAQRTFHTLDFYKKHQEAMTPAGLAFFQCRWDDSVTHTFHQL
                     LDMREPVFEFVRPPPYHPKQKRFPHQQPLRYLDRYRDSHEPTYGIY"
     exon            82..261
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
     exon            262..396
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
     exon            397..605
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
     exon            606..678
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
     exon            679..724
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
     exon            725..883
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
     exon            884..1020
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1307
                     /gene="Mrpl38"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgacctaggg aaagatggcg gcgccctggt ggcgtgccgc gttttccgtc actgggagat
       61 gccggggcat cagcacttcg gcctccctca gccgccggac accgccgctc gggcccatgc
      121 ccaacgagga cattgacgtg agcaacctgg agcggctgga gaagtaccgg agcttcgagc
      181 ggtaccgccg ccgggcggag caagaggcgc atgccccgca ctggtggcgg acctaccggg
      241 agtatttcct gaaggagaca gatcccaaag acagaatcaa catcgggctg cctccaccca
      301 gagtcagtcg gacccaaaag ctacaggagc ggaaacgctt tctccaggag cttcgtgcca
      361 attcggaaga agagagggca gcgcgcctcc gcacggctag catcccactg gaggcagtgc
      421 gggcagagtg ggagaggacg tgtggaccct accacaagca gcgtctggct gagtactacg
      481 gcctctacag agacctgttc cacggtgcca cttttgtgcc ctgggtcccc ctacacgtgg
      541 cgtatgccct gggagaagag gacctgatcc cagtgtatca tggcaatgaa gtgactccta
      601 ccgaggcttc ccaggctcca gaggtgacct atgaggcaga caaggattcc ttgtggacac
      661 tgctcttcat caacttggac ggacacctgc tggaaccaga tgctgagtac cttcactggc
      721 tggtaaccaa catccccagc aatagggtag ctgaagggca ggagagctgc ccctacctcc
      781 cccccttccc tgctcgaggc tctggcttcc accgctttgc cttcttgctc ttcaagcagg
      841 acaagccaat caacttctcc gaggacaccc gtccctcacc ctgctaccag ctggcccaga
      901 ggaccttcca cacccttgat ttctacaaga aacaccagga agccatgact ccagctggtc
      961 tggctttctt ccagtgccgc tgggatgact cggtcaccca caccttccac cagcttctag
     1021 acatgcggga acctgtgttt gaatttgtac ggccaccccc ttaccacccc aaacagaagc
     1081 gcttccccca ccagcagccc ctacgctatc tggaccgata cagggacagt catgagccca
     1141 cctatggaat ctactgagta ttcatcgaag agggtgagag ggcacagctg gaagctcaca
     1201 tctcaggaga gaccatcgga agccaactga gactccctgc agcccccccc ccccccagca
     1261 gacccagggg cttcggttat atgtgaataa aatgcttttt tcctgaaaaa aaaaaaaaaa
     1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//
