LOCUS       XM_039083225             717 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitochondrial ribosomal protein L30
            (Mrpl30), transcript variant X3, mRNA.
ACCESSION   XM_039083225
VERSION     XM_039083225.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..717
                     /gene="Mrpl30"
                     /note="mitochondrial ribosomal protein L30; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 25 long SRA reads, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 61 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:301352"
                     /db_xref="RGD:1308196"
     CDS             163..645
                     /gene="Mrpl30"
                     /codon_start=1
                     /product="39S ribosomal protein L30, mitochondrial isoform
                     X1"
                     /protein_id="XP_038939153.1"
                     /db_xref="GeneID:301352"
                     /db_xref="RGD:1308196"
                     /translation="MAGVLRSVFQRPPGRLQTVKKGAESLIGTEWIRHKFTRSRIPDK
                     VFQPRPEDHEKYGGDPQNPHKLHIVTRIRSTKRRPYWEKDTIKMLGLQKAHSPQIHKN
                     IPSVNAKLKVVKHLIRIQPLKLPQGLPTEETMSSTCLKSTGELVVQWHLKPVEQEAKS
                     "
ORIGIN      
        1 agtgagccca tgtctacata catgccggcc ccagtggttg ccggggttcc tcagaggaga
       61 tgaggtgtcc aaaagggagg atcaagtcag actcggtagt caggaatcgc gcagctctga
      121 ccgaccagca atcagcctct gaagagagga attcccacac ctatggctgg ggttctgcgc
      181 tcagtatttc agaggcctcc aggcagacta cagactgtga agaaaggtgc agaatctctc
      241 attggtacag agtggattcg tcacaaattt accagatcaa gaattccaga taaagtattt
      301 cagcctagac ctgaagatca tgaaaaatac ggtggagacc cccaaaaccc ccataaactg
      361 cacattgtta caagaataag aagcacaaag aggcgtccat actgggagaa agatacgatc
      421 aagatgctgg gactacagaa ggcacacagc cctcagatcc acaagaacat cccgtcagtg
      481 aatgcaaagc taaaagtggt taaacacttg atacgcatcc agcccctgaa gctgccacag
      541 ggacttccca cagaagagac catgtccagc acgtgcctca agagcactgg ggaattggtg
      601 gtgcagtggc atctgaagcc tgtggagcag gaagcaaagt cctgaggccg cacagattca
      661 ggcacagatg gacttgctga ggaaaccgtt ctcattaaag tgtgttaatc cagttat
//
