LOCUS       XM_008767056             714 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitochondrial ribosomal protein L30
            (Mrpl30), transcript variant X1, mRNA.
ACCESSION   XM_008767056
VERSION     XM_008767056.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008767056.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008767056.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..714
                     /gene="Mrpl30"
                     /note="mitochondrial ribosomal protein L30; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 21 ESTs, 53 long SRA reads, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 243 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:301352"
                     /db_xref="RGD:1308196"
     CDS             161..643
                     /gene="Mrpl30"
                     /codon_start=1
                     /product="39S ribosomal protein L30, mitochondrial isoform
                     X1"
                     /protein_id="XP_008765278.1"
                     /db_xref="GeneID:301352"
                     /db_xref="RGD:1308196"
                     /translation="MAGVLRSVFQRPPGRLQTVKKGAESLIGTEWIRHKFTRSRIPDK
                     VFQPRPEDHEKYGGDPQNPHKLHIVTRIRSTKRRPYWEKDTIKMLGLQKAHSPQIHKN
                     IPSVNAKLKVVKHLIRIQPLKLPQGLPTEETMSSTCLKSTGELVVQWHLKPVEQEAKS
                     "
ORIGIN      
        1 cctttcacgg aaccaaagaa tcgtatgcac tgttacggca acggcgcggt ttgtgtgtcg
       61 cgctggtccg gctgcctccg ttccgctcct tccggctgct ggggggcatt cggagtggac
      121 acagcggtcg ctgcctctga agagaggaat tcccacacct atggctgggg ttctgcgctc
      181 agtatttcag aggcctccag gcagactaca gactgtgaag aaaggtgcag aatctctcat
      241 tggtacagag tggattcgtc acaaatttac cagatcaaga attccagata aagtatttca
      301 gcctagacct gaagatcatg aaaaatacgg tggagacccc caaaaccccc ataaactgca
      361 cattgttaca agaataagaa gcacaaagag gcgtccatac tgggagaaag atacgatcaa
      421 gatgctggga ctacagaagg cacacagccc tcagatccac aagaacatcc cgtcagtgaa
      481 tgcaaagcta aaagtggtta aacacttgat acgcatccag cccctgaagc tgccacaggg
      541 acttcccaca gaagagacca tgtccagcac gtgcctcaag agcactgggg aattggtggt
      601 gcagtggcat ctgaagcctg tggagcagga agcaaagtcc tgaggccgca cagattcagg
      661 cacagatgga cttgctgagg aaaccgttct cattaaagtg tgttaatcca gtta
//
