LOCUS       NM_001398816            1046 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L28 (Mrpl28),
            mRNA.
ACCESSION   NM_001398816 XM_573060
VERSION     NM_001398816.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   3  (bases 1 to 1046)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 1046)
  AUTHORS   Haque,M.E., Elmore,K.B., Tripathy,A., Koc,H., Koc,E.C. and
            Spremulli,L.L.
  TITLE     Properties of the C-terminal tail of human mitochondrial inner
            membrane protein Oxa1L and its interactions with mammalian
            mitochondrial ribosomes
  JOURNAL   J Biol Chem 285 (36), 28353-28362 (2010)
   PUBMED   20601428
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Dec 23, 2021 this sequence version replaced XM_573060.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ219872.1, FQ118079.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-328               JAXUCZ010000010.1  15653179-15653506
            329-481             JAXUCZ010000010.1  15654244-15654396
            482-616             JAXUCZ010000010.1  15654979-15655113
            617-703             JAXUCZ010000010.1  15655197-15655283
            704-1046            JAXUCZ010000010.1  15655720-15656062
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..1046
                     /gene="Mrpl28"
                     /note="mitochondrial ribosomal protein L28"
                     /db_xref="GeneID:497876"
                     /db_xref="RGD:1583741"
     exon            1..328
                     /gene="Mrpl28"
                     /inference="alignment:Splign:2.1.0"
     CDS             41..814
                     /gene="Mrpl28"
                     /note="39S ribosomal protein L28, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein bL28m"
                     /protein_id="NP_001385745.1"
                     /db_xref="GeneID:497876"
                     /db_xref="RGD:1583741"
                     /translation="MPLHRYPVHLWQKLRLQQGICARLPSHFLRSLEEERTPTPVHYK
                     PHGAKFKINPKNGQRERVEDVPIPVHYPPESQQELWGGEGLILGYRYANNDKLSNRVK
                     KVWKPQLFTRELYSEILDKKFTVTVTMRTLDLIDEAYGFDFYILKTPEEDLCSKFGMD
                     LKRGMLLRLARQDPQLHPDNPERRAAIYDKYRNFVIPEAEAEWVGLTLEEALEKQRLL
                     EEKDPVPLFKVYVEELVQRLQEQALSRPAVVQKRAGDHV"
     exon            329..481
                     /gene="Mrpl28"
                     /inference="alignment:Splign:2.1.0"
     exon            482..616
                     /gene="Mrpl28"
                     /inference="alignment:Splign:2.1.0"
     exon            617..703
                     /gene="Mrpl28"
                     /inference="alignment:Splign:2.1.0"
     exon            704..1046
                     /gene="Mrpl28"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggcgcgggc gcgcttcttc cagaagtaga gggtcacgca atgccgctgc acaggtatcc
       61 tgtgcacctg tggcagaagc tgcggctgca gcaaggcatc tgtgcgcgct tgccctccca
      121 tttcttgcgc tcactggaag aagaacggac gccgaccccg gtacactaca aacctcacgg
      181 ggccaagttc aagatcaacc ccaagaacgg gcagcgcgag cgcgttgagg acgtacccat
      241 tccagttcac tatcctccag agtcccaaca ggaactgtgg ggtggagagg gcttgatttt
      301 gggctacaga tacgccaaca acgacaagct ctccaatagg gtgaagaagg tgtggaaacc
      361 tcagctgttc actcgggagc tttacagtga aatcttggac aagaagttca ccgtgactgt
      421 gaccatgagg accctggatc tcattgatga ggcctatgga ttcgacttct atattctcaa
      481 gacccctgag gaggacctgt gctccaagtt tggcatggac ctgaagcgag ggatgctgct
      541 gaggcttgcc cgccaggacc cccagctcca ccctgataac cccgagcgga gagcagccat
      601 ctatgacaag tacaggaact ttgtcatccc agaggcagag gccgagtggg ttggcctgac
      661 gctggaggag gccctggaga aacagaggct tctggaggaa aaggaccctg tgcccctgtt
      721 caaggtctac gtagaggagc tggtccagcg gcttcaggag caggctctgt ccaggcccgc
      781 agtggtgcag aagagagctg gtgaccacgt ctgaccactg ggctcagcct cccctgtggg
      841 cagagggcga acccctgctt ggcatgtgct gactgcacag ctcctgtagt agacttttca
      901 gagaaccctt ctgtgccagg actcgtggag gtctggagcg gagcagatgc ctgtctgagc
      961 tggtcaagtc cttgcagcat tatagttctt gggctgagct aagtctgagg cagtctgagc
     1021 cacagtaaag tgttggtttg cttgga
//
