LOCUS       NM_001107567             941 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L21 (Mrpl21),
            mRNA.
ACCESSION   NM_001107567 XM_001067014 XM_219576
VERSION     NM_001107567.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 941)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   3  (bases 1 to 941)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_219576.4, XM_001067014.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AW918643.1, CB577516.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q42"
     gene            1..941
                     /gene="Mrpl21"
                     /note="mitochondrial ribosomal protein L21"
                     /db_xref="GeneID:309140"
                     /db_xref="RGD:1310203"
     exon            1..264
                     /gene="Mrpl21"
                     /inference="alignment:Splign:2.1.0"
     CDS             165..794
                     /gene="Mrpl21"
                     /note="39S ribosomal protein L21, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein bL21m"
                     /protein_id="NP_001101037.1"
                     /db_xref="GeneID:309140"
                     /db_xref="RGD:1310203"
                     /translation="MAAAIAASVLPGFFGRLVSVCRRSILASQGPGPASLWSASRRFN
                     SQSASYPQGYVPKTSLSSPPWQEVVLPDPAEETRHHAEVVKKVNELIAAGQYGRLFAV
                     VHFASHQWKVTAEDLILIENELDIKCGERIRLEKVLLVGTDNFTLLGKPLLGKDLVRV
                     EATVIEKTESWPKINMKFRKRKNFRKKKIIVNPQTILRINTIEIAPRLL"
     exon            265..322
                     /gene="Mrpl21"
                     /inference="alignment:Splign:2.1.0"
     exon            323..408
                     /gene="Mrpl21"
                     /inference="alignment:Splign:2.1.0"
     exon            409..572
                     /gene="Mrpl21"
                     /inference="alignment:Splign:2.1.0"
     exon            573..625
                     /gene="Mrpl21"
                     /inference="alignment:Splign:2.1.0"
     exon            626..729
                     /gene="Mrpl21"
                     /inference="alignment:Splign:2.1.0"
     exon            730..941
                     /gene="Mrpl21"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgatttccg accggcccgt ttcctgtact ctctgccaag ccagtgactt gaagcagatc
       61 tgcagtagga tccctgtttc cctcctccag gtgttcccta ctgggcttgt gcgttgacgc
      121 acaaagttcg cgccgcttcc ggttccggtt gctactgtgg aaaaatggcg gctgccatag
      181 cggcctccgt attgccgggc tttttcgggc ggctggtgtc tgtgtgtagg cgtagcatct
      241 tggcatccca gggacccgga cctgcctctc tctggtctgc ttctcgaagg ttcaattcac
      301 agagtgcttc atatccacaa ggatatgttc ctaagacttc cctgagttca ccaccctggc
      361 aagaagtggt tctgccggac cctgctgaag agactagaca ccatgcagag gttgtgaaga
      421 aggtgaatga gctgatcgct gcgggccagt acggccgact ctttgctgtc gtgcactttg
      481 ccagccacca atggaaggtg accgctgagg acctgattct cattgaaaat gagctggaca
      541 tcaagtgtgg agagaggatt cggctggaga aggtcctatt ggttgggaca gacaacttca
      601 cactcctcgg caagccactc ctcggaaagg atctcgtacg agttgaagcc acagtcattg
      661 aaaagacaga atcatggccc aaaatcaaca tgaaatttag gaaaaggaaa aacttcagga
      721 agaaaaaaat cattgtgaac ccacagacca tcctccggat taacaccatt gagattgcac
      781 ctcgtttgct gtgaccgcag agcggatgtc taagaagttc tgagatgtct aataaactca
      841 ggaggctgag gcaggaggat tacaagttcc aggccaggtt gggctacaca gcaagaccct
      901 atctgacaat gataacaaat aaaatatttt gtaggagact g
//
