LOCUS       NM_001109428             759 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L20 (Mrpl20),
            mRNA.
ACCESSION   NM_001109428 XM_001058684
VERSION     NM_001109428.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   3  (bases 1 to 759)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 759)
  AUTHORS   Haque,M.E., Elmore,K.B., Tripathy,A., Koc,H., Koc,E.C. and
            Spremulli,L.L.
  TITLE     Properties of the C-terminal tail of human mitochondrial inner
            membrane protein Oxa1L and its interactions with mammalian
            mitochondrial ribosomes
  JOURNAL   J Biol Chem 285 (36), 28353-28362 (2010)
   PUBMED   20601428
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001058684.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ224518.1, CF976825.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..759
                     /gene="Mrpl20"
                     /note="mitochondrial ribosomal protein L20"
                     /db_xref="GeneID:680747"
                     /db_xref="RGD:1588219"
     exon            1..215
                     /gene="Mrpl20"
                     /inference="alignment:Splign:2.1.0"
     CDS             129..578
                     /gene="Mrpl20"
                     /note="39S ribosomal protein L20, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein bL20m"
                     /protein_id="NP_001102898.1"
                     /db_xref="GeneID:680747"
                     /db_xref="RGD:1588219"
                     /translation="MVFLTTRLWLRNRLTDRYWRVQEVLKHAGHFRGRKNRCYRLAVR
                     AVTRAFVKCTNSRRLKKRNLRTLWINRITAASQEHGLQYPAFILNLVKCQVELNRKVL
                     VDLAIYEPKTFKSLAALAKRRQQEGFAAALGDGKEPEGIFSRVVQYH"
     exon            216..326
                     /gene="Mrpl20"
                     /inference="alignment:Splign:2.1.0"
     exon            327..404
                     /gene="Mrpl20"
                     /inference="alignment:Splign:2.1.0"
     exon            405..759
                     /gene="Mrpl20"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actgaactca gggacgagtc tagaggcgac ccggaagaca gtgcttgcac acatccgtca
       61 gggcaggact ttctgaccgt tgacccggaa gcgcttatgg tagcccctcg ggattccggg
      121 gtcccatcat ggtcttcctt acgacgcggc tctggctacg gaaccgcctc acagaccgct
      181 attggcgggt tcaggaggtg ctgaaacatg ctgggcattt taggggaagg aagaatcgct
      241 gctaccggct ggccgtcagg gcggtgacca gagccttcgt taagtgtacg aactcccgca
      301 gacttaagaa gcggaacctg aggaccctct ggattaatcg aattacagct gcctcccagg
      361 aacatggctt acagtaccca gcatttattc tcaacttagt taagtgccag gtggagctca
      421 acaggaaagt acttgtggac ctggccatct atgaaccaaa gacgtttaaa tctttggctg
      481 ctttggctaa gaggaggcag caggaaggat ttgctgcagc tttgggggat ggaaaggagc
      541 ctgaaggtat cttttccaga gtggtacaat accactgaag gctgcagtgc tatagaaact
      601 gttaaaaaca agataggacc aaaaggattg tcaccagtaa gtctgatttg tatttattta
      661 cattttagca acaggcctga gacaacaggt gtttactcag tgacacagcc ccaaactgtc
      721 ctgtaaagaa tgtacaaata aagtttttgc agtgttgaa
//
