LOCUS       NM_001106205             980 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L18 (Mrpl18),
            mRNA.
ACCESSION   NM_001106205 XM_001062578 XM_214751
VERSION     NM_001106205.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Brown,A., Rathore,S., Kimanius,D., Aibara,S., Bai,X.C., Rorbach,J.,
            Amunts,A. and Ramakrishnan,V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 980)
  AUTHORS   Brown,A., Amunts,A., Bai,X.C., Sugimoto,Y., Edwards,P.C.,
            Murshudov,G., Scheres,S.H.W. and Ramakrishnan,V.
  TITLE     Structure of the large ribosomal subunit from human mitochondria
  JOURNAL   Science 346 (6210), 718-722 (2014)
   PUBMED   25278503
REFERENCE   3  (bases 1 to 980)
  AUTHORS   Bohm,D., Keller,K., Pieter,J., Boehm,N., Wolters,D., Siggelkow,W.,
            Lebrecht,A., Schmidt,M., Kolbl,H., Pfeiffer,N. and Grus,F.H.
  TITLE     Comparison of tear protein levels in breast cancer patients and
            healthy controls using a de novo proteomic approach
  JOURNAL   Oncol Rep 28 (2), 429-438 (2012)
   PUBMED   22664934
REFERENCE   4  (bases 1 to 980)
  AUTHORS   Smirnov,A., Entelis,N., Martin,R.P. and Tarassov,I.
  TITLE     Biological significance of 5S rRNA import into human mitochondria:
            role of ribosomal protein MRP-L18
  JOURNAL   Genes Dev 25 (12), 1289-1305 (2011)
   PUBMED   21685364
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC167033.1.
            
            On May 11, 2008 this sequence version replaced NM_001106205.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC167033.1, DV718085.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q11"
     gene            1..980
                     /gene="Mrpl18"
                     /note="mitochondrial ribosomal protein L18"
                     /db_xref="GeneID:292244"
                     /db_xref="RGD:1306387"
     exon            1..142
                     /gene="Mrpl18"
                     /inference="alignment:Splign:2.1.0"
     CDS             91..633
                     /gene="Mrpl18"
                     /note="39S ribosomal protein L18, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL18m"
                     /protein_id="NP_001099675.1"
                     /db_xref="GeneID:292244"
                     /db_xref="RGD:1306387"
                     /translation="MALQPRFWKCLSVCRNLECGFASLSTSSTPAVQPDVETKENEAV
                     APEFINRNPRNLELLGVARKERGWATVWPNREFWHRLRVVKTQHHVEAFVEHLNGQVV
                     VSASTREWAIKKHLYSTRNVVACESVGRVLAQRCLEAGINFMVYQPTPWEASSDSIKR
                     LQNAMTESGVMLREPRRVYE"
     exon            143..329
                     /gene="Mrpl18"
                     /inference="alignment:Splign:2.1.0"
     exon            330..561
                     /gene="Mrpl18"
                     /inference="alignment:Splign:2.1.0"
     exon            562..945
                     /gene="Mrpl18"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttaacatgg ctgcgactag ttattcaccg agacgaccgt gagcagagga aggcagggca
       61 ctgtgagact ttgcccactt ccggtcagcg atggcgcttc agccgcggtt ctggaaatgt
      121 ctgtcagttt gcaggaacct ggaatgtggg ttcgcatccc tctcaaccag ttccacgccg
      181 gcggtgcaac cggatgtgga gactaaggaa aatgaagcgg tggccccaga gttcatcaac
      241 cggaaccctc ggaatctgga gctcttaggt gtagcccgga aagaacgggg ctgggctaca
      301 gtgtggccca accgtgagtt ctggcacagg ttgagagttg taaagactca gcatcacgta
      361 gaagcatttg ttgagcacct taacggccag gttgtggttt cagcatcgac tcgtgaatgg
      421 gctattaaaa aacaccttta tagtaccaga aacgtggtgg cttgtgagag cgtagggcga
      481 gtgctggcac agcggtgctt ggaagcagga atcaacttca tggtctacca gcccaccccg
      541 tgggaggcgt cctcagactc gataaaacgt ttacaaaatg ccatgacaga aagtggtgtg
      601 atgctccggg aacctcgaag agtctatgaa taaaatccaa gtgtcaactg tggttggaag
      661 tgtaaatata aaacgaccat ctacagccac caaaagaaag catcttcatt aaaagaaaga
      721 aaaagagaaa gaaaggagca tttggaagga tggataatca gactgaaagc ttcatagcaa
      781 tgtaacagtg aaaacttact cagttagctt ctttccactt ctgtgtgtgc tggtgtggtt
      841 tcattgtttt aatcaagggc ttcaggtgtc cccattcttg gacatgagat gtatttaagg
      901 aaagtagtga ctatttgaag aacaaattaa aacgtttgta acaaaaaaaa aaaaaaaaaa
      961 aaaaaaaaaa aaaaaaaaaa
//
