LOCUS       NM_001029900            1563 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein L12 (Mrpl12),
            mRNA.
ACCESSION   NM_001029900 XM_221202
VERSION     NM_001029900.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Richter,R., Rorbach,J., Pajak,A., Smith,P.M., Wessels,H.J.,
            Huynen,M.A., Smeitink,J.A., Lightowlers,R.N. and
            Chrzanowska-Lightowlers,Z.M.
  TITLE     A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into
            the human mitochondrial ribosome
  JOURNAL   EMBO J 29 (6), 1116-1125 (2010)
   PUBMED   20186120
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Wang,Z., Cotney,J. and Shadel,G.S.
  TITLE     Human mitochondrial ribosomal protein MRPL12 interacts directly
            with mitochondrial RNA polymerase to modulate mitochondrial gene
            expression
  JOURNAL   J Biol Chem 282 (17), 12610-12618 (2007)
   PUBMED   17337445
REFERENCE   3  (bases 1 to 1563)
  AUTHORS   Graack,H.R., Bryant,M.L. and O'Brien,T.W.
  TITLE     Identification of mammalian mitochondrial ribosomal proteins (MRPs)
            by N-terminal sequencing of purified bovine MRPs and comparison to
            data bank sequences: the large subribosomal particle
  JOURNAL   Biochemistry 38 (50), 16569-16577 (1999)
   PUBMED   10600119
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jul 28, 2005 this sequence version replaced XM_221202.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ234892.1, FQ228179.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-302               JAXUCZ010000010.1  106256746-106257047
            303-489             JAXUCZ010000010.1  106257531-106257717
            490-576             JAXUCZ010000010.1  106257946-106258032
            577-714             JAXUCZ010000010.1  106260162-106260299
            715-1563            JAXUCZ010000010.1  106260401-106261249
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.3"
     gene            1..1563
                     /gene="Mrpl12"
                     /gene_synonym="Rpm12"
                     /note="mitochondrial ribosomal protein L12"
                     /db_xref="GeneID:303746"
                     /db_xref="RGD:1588559"
     CDS             1..831
                     /gene="Mrpl12"
                     /gene_synonym="Rpm12"
                     /note="ribosomal protein, mitochondrial, L12; 39S
                     ribosomal protein L12, mitochondrial"
                     /codon_start=1
                     /product="large ribosomal subunit protein bL12m"
                     /protein_id="NP_001025071.1"
                     /db_xref="GeneID:303746"
                     /db_xref="RGD:1588559"
                     /translation="MPRRAAGESSDPVLFPGPDCVCASRRLVRNIRSQPSRPGRQGLV
                     ARAARPARLLPDRASLPLRAACDLPACGAMLPAAAAAASRLWGPRLGLGGSALRLVRQ
                     QMPGVCVARQLRSSSHRRSEALAGAPLDNAPKEYPPKIQQLVQDIASLTLLEISDLNE
                     LLKKTLKIQDVGLMPMGGMVPGAVPAAAPAPEAAEEEDLPKQKEQTHFTVRLTEAKPV
                     DKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE
                     "
     exon            1..302
                     /gene="Mrpl12"
                     /gene_synonym="Rpm12"
                     /inference="alignment:Splign:2.1.0"
     exon            303..489
                     /gene="Mrpl12"
                     /gene_synonym="Rpm12"
                     /inference="alignment:Splign:2.1.0"
     exon            490..576
                     /gene="Mrpl12"
                     /gene_synonym="Rpm12"
                     /inference="alignment:Splign:2.1.0"
     exon            577..714
                     /gene="Mrpl12"
                     /gene_synonym="Rpm12"
                     /inference="alignment:Splign:2.1.0"
     exon            715..1563
                     /gene="Mrpl12"
                     /gene_synonym="Rpm12"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgccgcgga gggctgcagg agaaagctcc gacccagtac tatttccggg cccagactgc
       61 gtctgcgcgt cgcgccgcct agtgcgtaat atcagaagcc aaccaagtcg ccctggccgc
      121 caaggcctgg tggctagagc ggcccgtcca gctcgcctcc tcccggatag agcgtcgctt
      181 ccgctcagag ccgcgtgtga ccttcccgct tgcggagcta tgctgccggc ggcggcggcg
      241 gcggctagcc gcctgtgggg gccgcggctt ggactcgggg gatcagcgct ccgccttgtc
      301 aggcaacaga tgcccggtgt ctgtgtggcg cggcaattga gaagcagcag ccaccgaagg
      361 agtgaagcac tcgccggtgc acccctggat aatgctccca aggagtatcc ccccaagatc
      421 cagcagctgg tccaagacat tgccagtctt acgctcctgg agatctcaga cctcaatgaa
      481 ctcctgaaga aaacattgaa gatccaggat gtcggcctta tgccaatggg tggcatggtg
      541 cctggtgccg tccctgctgc agcaccagcc cctgaggcgg ccgaggaaga agacctccct
      601 aagcagaaag agcagacaca cttcacggtg cgcctgacgg aagcgaagcc tgtggacaaa
      661 gtgaagctga tcaaggagat caagaactac gttcagggca taaaccttgt gcaggccaag
      721 aagctggtgg agtccctgcc ccaggaaatc aaagctaacg tcgccaaagc tgaggcagag
      781 aagatcaagg cagccttgga ggcagtgggt ggcactgtgg ttctggagtg acagcactgc
      841 tccaaggact tatggactag agtccctggg atccaggcca agctgctcac cccgcttcac
      901 tcccaggcgg tgcggtacag tgtgagcaac agctactgac gctagtgacg gaggtctcct
      961 gagagagaga caacatggac ctactgtgat ggggtggggc agtgacaacc tttgcagaac
     1021 tctcaagaga ttgccttggg aactcaagtg aagacaccct ctggtggcta ctgagaaaat
     1081 atactattca ggccgggtgt gttcagtgag tggtctgtgt ccccagggct tggagtataa
     1141 aggaccacct tgaggcatgt gtatgtcctg aacctcaccc aggctctttg cccctgaatg
     1201 cctccctgtt gttcatgctt ggggtctgca gccatacatc acctcccatt gttggggtgg
     1261 ggtagctaat ctctggtacc ccataatagg ctgtgtccac ccagacacag catatatgga
     1321 gctgggtgta ggggaggggt tgtatcttga ggttcggatg gggagtttcc aattagatac
     1381 ttggagggat tgtgttcctt tgttgaagac agggtttcta tatgtagctc tggctgtcct
     1441 ggaactttgt ctggctttga atcggatcca cctgctctgc ctcctgtgtg tcagcactgc
     1501 ccaacatgta cttgaagttt tagaagtgac agtgtgatac tggcccaacc taccaagaca
     1561 gcc
//
