LOCUS       XM_039097264            2389 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus maestro (Mro), mRNA.
ACCESSION   XM_039097264
VERSION     XM_039097264.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-633               JACYVU010000301.1  29861598-29862230
            634-810             JACYVU010000301.1  29862233-29862409
            811-863             JACYVU010000301.1  29862411-29862463
            864-963             JACYVU010000301.1  29869069-29869168
            964-1110            JACYVU010000301.1  29871499-29871645
            1111-1296           JACYVU010000301.1  29872928-29873113
            1297-1452           JACYVU010000301.1  29877034-29877189
            1453-1560           JACYVU010000301.1  29877782-29877889
            1561-2389           JACYVU010000301.1  29878177-29879005
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2389
                     /gene="Mro"
                     /note="maestro; The sequence of the model RefSeq
                     transcript was modified relative to its source genomic
                     sequence to represent the inferred CDS: deleted 3 bases in
                     2 codons; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 10 ESTs, 3 Proteins, and 97%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 42 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:361348"
                     /db_xref="RGD:1559803"
     CDS             289..1614
                     /gene="Mro"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 3 bases in 2 codons"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: protein maestro"
                     /protein_id="XP_038953192.1"
                     /db_xref="GeneID:361348"
                     /db_xref="RGD:1559803"
                     /translation="MLLSNRIMWGRGGQSPGSLDWNDGAIYWHHGEMTPGSACLGKGE
                     VLRIVVLSGESVQESGLEELVRGRNSKQQAGDTSAVWSAKAQHLGRRKDNLVGVIGGQ
                     FPPPPHHLVLADPLSLICLAFLCSAGSKFREDLLASLFVGKETRAGKISLTHHIWRPI
                     PNRWNNAPPERPRTASSPETAVLHVTVTPGASFMEQMQRIPNQPLPTPASQSKKRRTP
                     LSSFFSKVSWKLRLQKREPLKNLFFVLAERARGPNPRKRHLAMRGLGILAHEAPDKQV
                     RKYKKVMLDLLVHGLYDPVSSEVIHESVKTLTIMLGKIQGQRLGSFFIDITLQTRTLL
                     DDEDDSVRYSAFVLFGQLAAFAGRKWKKFFTHQVNQTQDSLLSHLQDESPQVAKACTM
                     AVQACVPYLKPRKEQSFQSEEDQKNRRLSQQLSHYHPEILLFFYANKIL"
ORIGIN      
        1 ggattccatt acagatggtt gtgagccacc atgtggttgc tgggatttga actcaggacc
       61 tctggaagag cagtcagtgc tcttaaccgc tgagccgtct ctccagtttt taactaatgc
      121 attaagttgc tcagcgtttg aatcgctcct ttccggatat acagcacgtg ttgaactgga
      181 accggtgtta gcagttaaaa tacttgttag tgcgacagtc agtcacaatg ggctgcttgg
      241 catagggaca aagtacagtt cttagattaa acgctgagtt tagattaaat gctgctctct
      301 aacaggatta tgtgggggag aggaggccag agccctggaa gccttgactg gaatgatggc
      361 gccatctact ggcaccacgg ggaaatgacg ccgggcagcg cgtgtcttgg caagggtgaa
      421 gtcctcagaa ttgtcgttct ttctggagaa agtgtgcaag agtccggact ggaggaatta
      481 gtaaggggca ggaacagcaa gcagcaggca ggagacacct cggcagtctg gagcgcaaag
      541 gcgcagcatc ttgggcggag gaaggacaac cttgtgggtg tcattggagg gcagttccct
      601 cccccacctc accacctcgt actggcggat cctctctctt tgatttgtct cgctttccta
      661 tgctctgctg gctccaaatt ccgagaggac cttctggctt ctctttttgt aggtaaggaa
      721 accagggctg ggaaaatctc gctgactcac cacatttgga ggccaatccc gaatcggtgg
      781 aacaacgcgc ctcccgagag acccaggact gcctccagcc ccgaaacagc ggttcttcac
      841 gtgacagtca ccccaggagc cagtttcatg gaacaaatgc agagaatccc gaaccagccc
      901 ctccccaccc ctgcttctca gtccaagaag aggaggacac cactgtcatc tttcttttcc
      961 aaggtctctt ggaaactgag gttgcagaag cgggaacctt tgaagaatct gtttttcgtc
     1021 ttggcagaaa gagcccgggg tcctaatcct agaaagcgcc atctagcaat gagaggcctg
     1081 ggtatcttgg cccatgaagc tcctgacaag caggtgagaa agtataagaa agttatgctt
     1141 gacctgctgg tacacgggct gtatgatcct gtgagttccg aagtcattca tgagagtgtg
     1201 aagacgctga ctatcatgtt gggcaagatc cagggccaac ggctgggctc cttcttcata
     1261 gacatcaccc ttcagacccg gaccctattg gatgatgagg atgacagcgt gcgctactca
     1321 gcctttgtcc tctttgggca gttggctgca tttgctgggc ggaaatggaa gaagttcttc
     1381 acccaccagg tcaaccagac ccaagattcc ctcctaagcc atttgcagga cgaaagccct
     1441 caggttgcca aggcttgcac aatggctgtt caagcctgtg ttccatacct gaaacccaga
     1501 aaggagcaga gtttccaaag tgaagaagac cagaagaacc gcaggctttc ccagcaactg
     1561 agccactacc atccagagat cctgctgttc ttctatgcca ataaaatcct gtaggtccag
     1621 agcagcagag aaagcccacg ggagtgccct gccccggcat ggaatttccc atctgtctca
     1681 taggatacct ctttgactct cgagtgattg taagagaaaa gaggatgtca gagagcaact
     1741 gaaaaaaaaa tcaccctgga gtgcacgcaa agtaaaattc tatgcaagtg tgtgcacata
     1801 catgcacatg actgtggagg tcagaggacg acctcactgc tgttcctaag gcgtcatcca
     1861 tctttccact gaaacaggat ctttgactgg cctggggctt gcaggagctt agactaggct
     1921 tgatagctag tgagccagct ctggggttat aaccacagtc catcgaacca accgtttttg
     1981 actgtgccaa attcaggccc ttatacctac ttgtgctgac taagccgtct ccccagccca
     2041 gtagatgcac acttccttaa aacatttaac atgcatgatg tcccaatccc tcctttctca
     2101 ctccctctct gccaggtgac acacatttat aatatgtaac ttctgaggct tgggggaaca
     2161 attgttacct taaacatttt taaactgtat ttgtttttga tagtttgcta tttgctacgg
     2221 accaggagac caaggagctg gcttacaatg tgtctttaat ttcggatgat cttaaaatgt
     2281 catggtctta aaatcgtctt taaaaagaac aacaaggaaa agaaatattg ttgaaaatcc
     2341 actgaatgat gataagttac agaataaaaa cagtaacatt tactgagaa
//
