LOCUS       NM_001010947            1621 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus methylthioribose-1-phosphate isomerase 1 (Mri1),
            mRNA.
ACCESSION   NM_001010947 XM_213843
VERSION     NM_001010947.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Xin,X., Rual,J.F., Hirozane-Kishikawa,T., Hill,D.E., Vidal,M.,
            Boone,C. and Thierry-Mieg,N.
  TITLE     Shifted Transversal Design smart-pooling for high coverage
            interactome mapping
  JOURNAL   Genome Res 19 (7), 1262-1269 (2009)
   PUBMED   19447967
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On May 26, 2021 this sequence version replaced NM_001010947.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089060.1, FQ213644.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-423               JAXUCZ010000019.1  40812132-40812554
            424-599             JAXUCZ010000019.1  40813210-40813385
            600-776             JAXUCZ010000019.1  40815380-40815556
            777-1001            JAXUCZ010000019.1  40815645-40815869
            1002-1621           JAXUCZ010000019.1  40817906-40818525
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q11"
     gene            1..1621
                     /gene="Mri1"
                     /gene_synonym="RGD1307789"
                     /note="methylthioribose-1-phosphate isomerase 1"
                     /db_xref="GeneID:288912"
                     /db_xref="RGD:1307789"
     exon            1..423
                     /gene="Mri1"
                     /gene_synonym="RGD1307789"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..1162
                     /gene="Mri1"
                     /gene_synonym="RGD1307789"
                     /EC_number="5.3.1.23"
                     /note="methylthioribose-1-phosphate isomerase homolog;
                     M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate
                     isomerase; translation initiation factor eIF-2B subunit
                     alpha/beta/delta-like protein"
                     /codon_start=1
                     /product="methylthioribose-1-phosphate isomerase"
                     /protein_id="NP_001010947.1"
                     /db_xref="GeneID:288912"
                     /db_xref="RGD:1307789"
                     /translation="MRLEAIRYSPGSLQILDQLQLPEHCHYETLSSVQQAREAIRAMK
                     VRGAPAIALVGCLSLAVELQAGAGGPGLAALVAFVRDQLSLLVAARPTAVNMARAARD
                     LTHMAAREAELEGATEETVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGG
                     KVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVY
                     EKIPATLITDSMAAAAMVHQGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHHGIPF
                     YVAAPSSSCDLRLETGKEIVIEERPSQELTDLNGVRIAAQGIRVWNPAFDVTPHELIT
                     GGIITELGVFAPEELRAALSATIFSEGQTLDSPQM"
     exon            424..599
                     /gene="Mri1"
                     /gene_synonym="RGD1307789"
                     /inference="alignment:Splign:2.1.0"
     exon            600..776
                     /gene="Mri1"
                     /gene_synonym="RGD1307789"
                     /inference="alignment:Splign:2.1.0"
     exon            777..1001
                     /gene="Mri1"
                     /gene_synonym="RGD1307789"
                     /inference="alignment:Splign:2.1.0"
     exon            1002..1621
                     /gene="Mri1"
                     /gene_synonym="RGD1307789"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctccgccccg caacctgtgc gggattctgt gtggccctgt acggtaggca acatgagact
       61 ggaagcgatc cgctactcgc cgggctcgct gcagatcctc gaccagctgc agctgccgga
      121 gcactgccac tatgagacgc tgagctccgt gcagcaggcc agggaagcga tccgcgccat
      181 gaaggtgcgc ggcgctcccg ccatcgcgct ggtgggttgc ctcagcctgg ctgtagagct
      241 gcaggcgggt gcgggcggtc cggggctcgc cgctctggtg gccttcgtgc gagaccagct
      301 gagcctcctt gtcgccgccc ggcccacagc tgtcaacatg gcccgcgccg cccgcgatct
      361 gactcacatg gcggcccgag aggcggaact agagggtgct actgaagaga ccgtgcggga
      421 aagagtgatc cgctttgccg aggacatgtt ggagaaagac ctcaaagata accggagcat
      481 tggcgacttg ggagcccgcc atctcctaga gcagaccaac cccaggggtg gcaaggtgac
      541 tgtgctgacc cactgtaaca ccggtgctct ggccactgcc ggctacggta cagcattagg
      601 tgtgatccgc tcactgcacg agatgggtcg actggagcat accttctgca cggaaacccg
      661 gccctacaac cagggagcac ggctgacagc cttcgagctg gtgtacgaga agatccctgc
      721 gactctcatc actgacagta tggccgctgc agccatggta caccagggtg tgtcagctgt
      781 ggtggtggga gctgatcgtg ttgttgccaa cggagacaca gccaacaaga taggcaccta
      841 ccagctggcc atcgtcgcca agcaccacgg tatccccttc tatgtggctg cccccagttc
      901 atcctgtgac ctccgtctgg agactggaaa ggagattgtc atagaggaac gccccagcca
      961 ggagctgact gacctgaatg gagtcaggat tgctgcacag ggaatccggg tttggaatcc
     1021 tgcctttgat gtcacccccc acgaactcat cacaggcggc atcatcactg agctgggtgt
     1081 ctttgcccct gaggagctcc gtgcagccct aagcgccacc atcttctcag agggacagac
     1141 cctagatagt ccccagatgt gactagctgg cttcccctgc cctgccttct tctggtttta
     1201 taataaagtt ctcaaatggc tactcaaagt tcatcttcac ccacagtccc ctcctccagc
     1261 tgcaggagca gctatggttt gccaggctcc tcctttgaat gatctatgca tggggcaaaa
     1321 gccagatgtg ggagtcatac acctatcatc ccagcgcctg ggaggctgag gcaggaagat
     1381 ttctttgaag cttaggctac tccgggttat agattgaaac aaacacaagt agaggtaatc
     1441 aggagggtct cttagttaca ttcgaagagt ttttgtcatt tctgttctgt ttttctagac
     1501 aggatttctc tgtgtggccc tggctatcct ggaaaaatct gtggaccagg ctggtctcaa
     1561 aatcagagat cctcctgcct ctgcctcccg agtgctggga ttaaagacgt gcaccaccgc
     1621 t
//
