LOCUS       NM_021265               2201 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus MAGUK p55 scaffold protein 4 (Mpp4), mRNA.
ACCESSION   NM_021265
VERSION     NM_021265.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Aartsen,W.M., Kantardzhieva,A., Klooster,J., van Rossum,A.G., van
            de Pavert,S.A., Versteeg,I., Cardozo,B.N., Tonagel,F., Beck,S.C.,
            Tanimoto,N., Seeliger,M.W. and Wijnholds,J.
  TITLE     Mpp4 recruits Psd95 and Veli3 towards the photoreceptor synapse
  JOURNAL   Hum Mol Genet 15 (8), 1291-1302 (2006)
   PUBMED   16520334
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Kantardzhieva,A., Gosens,I., Alexeeva,S., Punte,I.M., Versteeg,I.,
            Krieger,E., Neefjes-Mol,C.A., den Hollander,A.I., Letteboer,S.J.,
            Klooster,J., Cremers,F.P., Roepman,R. and Wijnholds,J.
  TITLE     MPP5 recruits MPP4 to the CRB1 complex in photoreceptors
  JOURNAL   Invest Ophthalmol Vis Sci 46 (6), 2192-2201 (2005)
   PUBMED   15914641
REFERENCE   3  (bases 1 to 2201)
  AUTHORS   Conte,I., Lestingi,M., den Hollander,A., Miano,M.G., Alfano,G.,
            Circolo,D., Pugliese,M., Testa,F., Simonelli,F., Rinaldi,E.,
            Baiget,M., Banfi,S. and Ciccodicola,A.
  TITLE     Characterization of MPP4, a gene highly expressed in photoreceptor
            cells, and mutation analysis in retinitis pigmentosa
  JOURNAL   Gene 297 (1-2), 33-38 (2002)
   PUBMED   12384283
REFERENCE   4  (bases 1 to 2201)
  AUTHORS   Inagaki,H., Maeda,S., Lin,K.H., Shimizu,N. and Saito,T.
  TITLE     rDLG6: a novel homolog of Drosophila DLG expressed in rat brain
  JOURNAL   Biochem Biophys Res Commun 265 (2), 462-468 (1999)
   PUBMED   10558890
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Nov 27, 2008 this sequence version replaced NM_021265.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-76                JAXUCZ010000009.1  68102975-68103050   c
            77-198              JAXUCZ010000009.1  68101528-68101649   c
            199-276             JAXUCZ010000009.1  68097246-68097323   c
            277-357             JAXUCZ010000009.1  68095850-68095930   c
            358-489             JAXUCZ010000009.1  68095008-68095139   c
            490-571             JAXUCZ010000009.1  68094538-68094619   c
            572-657             JAXUCZ010000009.1  68092291-68092376   c
            658-729             JAXUCZ010000009.1  68091789-68091860   c
            730-926             JAXUCZ010000009.1  68090245-68090441   c
            927-991             JAXUCZ010000009.1  68089367-68089431   c
            992-1009            JAXUCZ010000009.1  68086905-68086922   c
            1010-1048           JAXUCZ010000009.1  68085767-68085805   c
            1049-1069           JAXUCZ010000009.1  68084592-68084612   c
            1070-1084           JAXUCZ010000009.1  68080267-68080281   c
            1085-1126           JAXUCZ010000009.1  68077043-68077084   c
            1127-1297           JAXUCZ010000009.1  68074929-68075099   c
            1298-1378           JAXUCZ010000009.1  68073316-68073396   c
            1379-1472           JAXUCZ010000009.1  68068404-68068497   c
            1473-1581           JAXUCZ010000009.1  68067653-68067761   c
            1582-1716           JAXUCZ010000009.1  68066157-68066291   c
            1717-2201           JAXUCZ010000009.1  68063867-68064351   c
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q31"
     gene            1..2201
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /note="MAGUK p55 scaffold protein 4"
                     /db_xref="GeneID:58808"
                     /db_xref="RGD:620016"
     CDS             1..1908
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /note="discs large homolog 6; rDLG6; membrane protein,
                     palmitoylated 4 (MAGUK p55 subfamily member 4); membrane
                     palmitoylated protein 4"
                     /codon_start=1
                     /product="MAGUK p55 subfamily member 4"
                     /protein_id="NP_067088.2"
                     /db_xref="GeneID:58808"
                     /db_xref="RGD:620016"
                     /translation="MRQSDRGAELTDEDRALSTAPNPENGLSGILRLLLQELSLFYSR
                     DVHGLCLLYDLLHSPWLQALLKVYDCLQKFKEKKLVPATTHAQILSCEVLELLPKASS
                     SPEIQELRQVLQAPHCKALLRAHDTVAQKDFEPLLPPLPDNIPDSEEAMRTVCLVKNQ
                     QPLGATIKRHEITGDILVARVIHGGLVERSGLLYAGDKLVEVNGVPVEGLDPEQVIHI
                     LAMSCGTIMFKVIPVSAPPVSSQTTVYVRAMIDYWPQEDPDIPCMDAGLPFLKGDILQ
                     IVDQSDALWWQARKISDLAICAGLIPSNHLLKRKQREFWWSQPYQPHTCLKSTRSLSV
                     EEEDSMKIDEKCVEADEETFESEELAEAKEEFVGDGQQFFIAGFRRSMRLCRRKSHFS
                     QLHANMRCTCSCYSAVGAPYEEVVRYQRQPADKHRLIVLVGPSGVGVNELRRQLIGCN
                     PSCFQSAVPHTTRSPKSYEMDGREYHYVSRETFESLMYGHRMLEFGEYKGHLYGTSVN
                     AVLAVLDEGKICVMDLEPQDIQLARTRELKPYVIFIKPPSMSSMRHSRRNAKIITDYF
                     VDMKFKDEDLQEMEELAQKMESQFGQFFDHVIVNDNLQDARAQLLSAIQKAEEELQWV
                     PEAWVSPGAES"
     exon            1..76
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            77..198
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            199..276
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            277..357
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            358..489
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            490..571
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            572..657
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            658..729
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            730..926
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            927..991
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            992..1009
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1048
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1049..1069
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1070..1084
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1085..1126
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1127..1297
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1298..1378
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1379..1472
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1473..1581
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1582..1716
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
     exon            1717..2201
                     /gene="Mpp4"
                     /gene_synonym="Dlg6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaggcagt ctgacagagg agcagagctg accgacgagg acagggctct ttccacagca
       61 cccaatcctg agaacggtct ctctgggatc ctgaggctcc tactgcagga actgagtctt
      121 ttctacagcc gggatgtgca tggtctgtgt ctcttatatg acctcctcca ttcaccgtgg
      181 ctacaggctc tgctaaaagt ctatgactgc ctccagaagt ttaaagagaa gaagctagtt
      241 cctgctacaa ctcatgcaca gatcttatcc tgtgaggtct tggagctgtt acccaaagcc
      301 tccagttccc ctgagatcca agagctaagg caagtcctcc aggctccgca ctgcaaggct
      361 ttgctgaggg cccatgacac agtggctcag aaagactttg aaccccttct ccctccactg
      421 ccagacaata tccccgacag tgaagaagca atgaggactg tctgtctggt gaaaaaccaa
      481 cagcccctgg gagctaccat caagcgtcac gagataacag gggatatcct ggtggccaga
      541 gtcatccacg gtgggctggt ggagaggagc gggttgctct atgctggaga taaactggtg
      601 gaagttaatg gagttcccgt agagggtctg gaccctgagc aagtgatcca tattctggct
      661 atgtcgtgtg gtacgatcat gttcaaggtg attccggtct ctgcaccgcc tgtgagcagc
      721 cagacgacag tttatgttcg tgccatgatt gattactggc cccaagagga ccctgacatc
      781 ccctgcatgg atgccggatt gcctttcctg aaaggggata ttctccagat tgtggaccag
      841 agtgatgccc tctggtggca ggcccggaaa atctcagacc ttgcaatctg tgctgggcta
      901 atcccttcta accaccttct gaagaggaaa cagcgggaat tctggtggtc tcagccgtac
      961 cagcctcata cctgcctcaa atccacccga tcactgtctg tggaagaaga agatagcatg
     1021 aagattgacg agaagtgtgt ggaagcagat gaagaaactt ttgaatctga ggaactcgca
     1081 gaagctaaag aggaatttgt cggcgatggg cagcagtttt ttatcgctgg cttccgccgc
     1141 agcatgcgcc tgtgtcgcag gaagtctcac ttcagccagc tgcatgccaa catgcgttgc
     1201 acctgcagct gttacagtgc tgtgggtgcc ccttacgagg aggtagtgag gtaccagcgt
     1261 cagccggcag acaaacaccg cctcatagtg cttgtgggac cttctggtgt tggagtcaat
     1321 gaactgagaa gacaactcat tggatgtaac cccagctgtt ttcaaagtgc tgtgccacat
     1381 accacccgtt ccccgaagag ttatgaaatg gacgggcgtg agtatcacta cgtgtcaagg
     1441 gaaacatttg aaagcctcat gtatggacac aggatgctgg agttcggcga gtacaaaggc
     1501 cacctgtatg gaaccagtgt gaatgctgta cttgcagtcc ttgacgaagg gaagatctgt
     1561 gtcatggact tggagcctca ggatattcag ttggctcgaa cccgtgaact gaagccctat
     1621 gtcatattta ttaagccacc tagcatgagc tccatgagac actctaggag gaatgctaag
     1681 attattactg actactttgt ggacatgaag ttcaaggatg aagacctaca agagatggag
     1741 gagctagccc agaaaatgga gagtcagttt ggccagtttt ttgatcacgt gattgtgaat
     1801 gacaacttgc aagatgcccg tgcccagctg ttgtctgcca tacagaaggc tgaggaagaa
     1861 ctgcagtggg taccagaggc atgggtttcc cctggcgctg aatcttaaaa gatccagact
     1921 aacagctgcc attgagagca cgacaactgc aactacgaag ggctgcagct tatggaacgg
     1981 ctttaactag catctaacta gcatcgtata cttataggga gctactcgtt tggctctcag
     2041 gcatttcccc gctgtttccc catataagct aaaggtaggg atgtgaacaa tggtgtctct
     2101 gtatgtgaga atattacaga tttcatatgt tgtaagacgg ctttcaaaaa tcttctaaat
     2161 aaatcagact aatgacagaa gctgtatttt actttgtaaa a
//
