LOCUS       NM_053668               2822 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus MAGUK p55 scaffold protein 3 (Mpp3), mRNA.
ACCESSION   NM_053668 XM_001081482 XM_340911
VERSION     NM_053668.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Leonoudakis,D., Conti,L.R., Anderson,S., Radeke,C.M., McGuire,L.M.,
            Adams,M.E., Froehner,S.C., Yates,J.R. 3rd and Vandenberg,C.A.
  TITLE     Protein trafficking and anchoring complexes revealed by proteomic
            analysis of inward rectifier potassium channel (Kir2.x)-associated
            proteins
  JOURNAL   J Biol Chem 279 (21), 22331-22346 (2004)
   PUBMED   15024025
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Karnak,D., Lee,S. and Margolis,B.
  TITLE     Identification of multiple binding partners for the amino-terminal
            domain of synapse-associated protein 97
  JOURNAL   J Biol Chem 277 (48), 46730-46735 (2002)
   PUBMED   12351654
REFERENCE   3  (bases 1 to 2822)
  AUTHORS   Butz,S., Okamoto,M. and Sudhof,T.C.
  TITLE     A tripartite protein complex with the potential to couple synaptic
            vesicle exocytosis to cell adhesion in brain
  JOURNAL   Cell 94 (6), 773-782 (1998)
   PUBMED   9753324
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On or before Feb 10, 2013 this sequence version replaced
            XM_340911.5, XM_001081482.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ211573.1, SRR26643298.64264.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-49                JAXUCZ010000010.1  87474763-87474811   c
            50-173              JAXUCZ010000010.1  87473949-87474072   c
            174-292             JAXUCZ010000010.1  87473600-87473718   c
            293-370             JAXUCZ010000010.1  87473303-87473380   c
            371-451             JAXUCZ010000010.1  87472019-87472099   c
            452-589             JAXUCZ010000010.1  87471631-87471768   c
            590-671             JAXUCZ010000010.1  87469358-87469439   c
            672-757             JAXUCZ010000010.1  87467148-87467233   c
            758-832             JAXUCZ010000010.1  87465333-87465407   c
            833-1029            JAXUCZ010000010.1  87461938-87462134   c
            1030-1094           JAXUCZ010000010.1  87458296-87458360   c
            1095-1115           JAXUCZ010000010.1  87457048-87457068   c
            1116-1157           JAXUCZ010000010.1  87456489-87456530   c
            1158-1322           JAXUCZ010000010.1  87455320-87455484   c
            1323-1403           JAXUCZ010000010.1  87455157-87455237   c
            1404-1497           JAXUCZ010000010.1  87451719-87451812   c
            1498-1606           JAXUCZ010000010.1  87451367-87451475   c
            1607-1729           JAXUCZ010000010.1  87448359-87448481   c
            1730-2822           JAXUCZ010000010.1  87445905-87446997   c
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..2822
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /note="MAGUK p55 scaffold protein 3"
                     /db_xref="GeneID:114202"
                     /db_xref="RGD:620015"
     exon            1..49
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            50..173
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     CDS             149..1906
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /note="protein Dlgh3; discs large homolog 3; protein MPP3;
                     membrane palmitoylated protein 3; membrane protein,
                     palmitoylated 3 (MAGUK p55 subfamily member 3)"
                     /codon_start=1
                     /product="MAGUK p55 subfamily member 3"
                     /protein_id="NP_446120.1"
                     /db_xref="GeneID:114202"
                     /db_xref="RGD:620015"
                     /translation="MPVLSEDSGLHETLALLTSQLRPDSNHREEMGFLRDVFSEKSLG
                     YLMKIHEKLRYYERQSPTPVLHSAMALAEDVMEELQAASVHSDERELLQLLSTPHLRA
                     VLMVHDTVAQKNFDPVLPPLPDNIDEDFEEESVKIVRLVKNKEPLGATIRRDEHSGAV
                     VVARIMRGGAADRSGLVHVGDELREVNGITVLHKRPDEISQILAQSQGSITLKIIPAT
                     QEEDRFKESKVFMRALFHYDPREDRAIPCQEAGLPFQQRQVLEVVSQDDPTWWQAKRV
                     GDTNLRAGLIPSKQFQERRLSYRRTTGTIPSPQNLRKPLYDQPCDKETCDCDGYFKGH
                     YVAGLRRSFRLGCRERLTGSQEVKVPVGAESQVLLTYEEVARYQHQPGERSRLVVLIG
                     SLGAHLHELKQRVVAEDPQHFGVAVPHTTRPRKSHEREGVEYHFVSKQAFEADIQHNK
                     FLEHGEHKENLYGTSLEAIQTVMAKNKVCLVDVEPEALRHLRTPEFKPYVIFVKPAIQ
                     EKRKTPPVSPDSEDPATPLDEQQQEMAASAAFIDQHYGHLIDTVLVRQDLQSVCSQLR
                     AVIESLSKDTYWVPISWVR"
     exon            174..292
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            293..370
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            371..451
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            452..589
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            590..671
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            672..757
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            758..832
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            833..1029
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1030..1094
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1115
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1116..1157
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1158..1322
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1323..1403
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1404..1497
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1498..1606
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1607..1729
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1730..2822
                     /gene="Mpp3"
                     /gene_synonym="CSG18; Dlg3; Dusp3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agccgggagg gttggagagt tgggggcgca gctggaagcc gccgagggga ggtcataagc
       61 agatccgggt gatgtgcatt cattgctgaa gattcctctc ccacccacac aaactgtagg
      121 gacagctggg gacctgccgg gcacaggcat gccggtactg tccgaagact cgggtttgca
      181 tgagaccctg gcactcctca cctctcagct caggcctgac tccaaccaca gggaggagat
      241 gggcttcctg agggatgtct tcagtgagaa gagcctcggt tacttaatga agattcacga
      301 gaaactccgc tattatgaga ggcagagtcc gaccccggtc ctacacagcg ccatggccct
      361 tgctgaggat gtgatggagg aactgcaggc tgcctcggtg cacagcgatg aacgggagct
      421 gctacagctg ctgtccaccc cccacctcag ggctgtgctc atggtacacg acacagttgc
      481 ccagaagaac ttcgatcctg ttctgccccc tctgcctgat aatatcgacg aggattttga
      541 agaggaatca gtgaagattg ttcgccttgt caagaataag gagcccctgg gtgccactat
      601 ccgaagggat gagcattcgg gggctgtcgt ggtggccagg atcatgcgag ggggtgcagc
      661 ggatcggagc ggtctggtcc acgttggtga cgagctccgg gaggtgaatg ggatcaccgt
      721 cctgcacaaa cgtccagacg agatcagcca aattctggcc caatcccagg gatccatcac
      781 cctcaagatc atccctgcca cccaggagga agaccgcttc aaagagagca aggtgttcat
      841 gcgtgccctc ttccactatg accctcggga ggaccgtgcc atcccctgcc aggaggcagg
      901 cctgcccttc cagcagaggc aggtcctgga ggtggtgagc caagatgacc ccacctggtg
      961 gcaggccaag agagtgggag acaccaacct tcgagctggc ctcattccct ccaagcagtt
     1021 ccaggagagg aggctaagct accggagaac cactggcacc ataccaagcc cccagaacct
     1081 cagaaagccc ctctatgatc agccttgtga caaagagacc tgtgactgtg atgggtactt
     1141 caaaggacac tatgtggctg gccttcggag aagcttccga ctgggctgca gagagaggct
     1201 gactggttca caggaagtaa aggtccctgt aggagctgag tctcaggtgc tgctgaccta
     1261 cgaggaagtg gccaggtacc aacaccagcc tggggagcgg tcccgcctgg tggttctcat
     1321 tgggtctctg ggagcccacc tgcacgagct gaagcaaagg gtggtggctg aggaccccca
     1381 gcattttggt gttgctgttc cacacaccac caggccccgg aagagccacg agagagaagg
     1441 ggtcgagtat cattttgtct ccaagcaagc atttgaggcc gacatccagc acaacaagtt
     1501 cctggaacat ggagaacata aggagaatct ctacgggacc agcctggagg ccattcagac
     1561 cgttatggcc aaaaacaaag tttgtttggt ggatgtagaa ccagaagcac taagacacct
     1621 gaggaccccc gagtttaagc cctatgttat atttgtgaag cctgcaattc aggagaaaag
     1681 gaagacgccg ccggtgtccc cagactctga ggacccagca actccacttg atgaacagca
     1741 gcaagagatg gccgcctctg ctgccttcat tgatcagcac tacggacacc tgatagacac
     1801 cgtgctcgta cggcaggacc tgcagagtgt ctgcagccag ctccgagctg tcatagagtc
     1861 gctgagcaag gacacttact gggtacccat cagctgggtg aggtaacttc accccatagc
     1921 atccagtctg gagggacctt gaagaccaga tagtccagcc tccctcgtgt accgtcaagg
     1981 aatctcaagt gcagagagga ccaggatttc ccacagaccg tcgtcaccga gcgttagtgg
     2041 gaagcctcgc ccggtggtgt tggatttccg tctgtccctt gcactgcggc ccttcacggg
     2101 tggagctgaa aggggcagtt cacaggatag cgtgtcattc gttcaagtct cgcaggcacg
     2161 ttggccttga ttctttgtac caaagctacg tagccactgt cttttcgggg gtggtggtgg
     2221 tgaatttgta ttgtggttta cagcgatgtt tcagctttat aaatatgaca cgtcgctggc
     2281 ccagcatttt ggaaactgtt ttacgcaact gatcttccgt gcacctgaag acctccttct
     2341 ggcttgcagc cctgcaatgt ttgtgttgtt tggtttattt tgttttgttt gggggagggg
     2401 gggtaatgct tgcctggtgg tagcgaaatt agttccctgc cttttcactc ggtgcgcata
     2461 cgtgattttt tttttcctgc aagacagagg cacacttcac ggtccacatg gctcactagg
     2521 ccggtctaca aagcagcagt gcctttgggg actcttgagg aatgtcaggc tgcctgtccc
     2581 ctttctgaaa ccctcctccc accccccaac ccccaccccc atgctcctga aagtgagtcc
     2641 ctgatgtgac tgacttgtcc tttgctttca gctgtctctt agctgccttg gttccacacc
     2701 gtctctattt tcagatcggg gctcctgttg tgctgggttg tggggagtca gatgactccc
     2761 atctgtcaaa gctctgtcta agccacaata aatcagtcct gtcaaaagta tgcagactcg
     2821 aa
//
