LOCUS       NM_001085406            1566 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus MPN domain containing (Mpnd), mRNA.
ACCESSION   NM_001085406 XM_001058890 XM_001059058
VERSION     NM_001085406.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB768016.1 and BC101893.1.
            
            On or before Apr 29, 2007 this sequence version replaced
            XM_001059058.1, XM_001058890.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158552.1, SRR8487231.186093.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-172               CB768016.1         15-186
            173-1566            BC101893.1         1-1394
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..1566
                     /gene="Mpnd"
                     /note="MPN domain containing"
                     /db_xref="GeneID:681944"
                     /db_xref="RGD:1589335"
     exon            1..28
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..1485
                     /gene="Mpnd"
                     /codon_start=1
                     /product="MPN domain-containing protein"
                     /protein_id="NP_001078875.1"
                     /db_xref="GeneID:681944"
                     /db_xref="RGD:1589335"
                     /translation="MAAPESLSSTATAEEAPEEDEDEAETEDPERGTGSGGRSGSLGG
                     SGGSTAGPGLALGGALTRRAVTLRVLLKDELLEPGEGVLSIYYLGRKFIGDLKLDGRI
                     VWQENGQVFNSPSAWATHCKKLVNPAKKSGCGWASVKYKGQKLDKYKAAWLRRHQLHM
                     PVAAADESPTSEGEEEELLLEEEEEDVLAGVSSEYKGHRPPGKGSLEPEATPPGKRVD
                     KVRVPVRYCMLGSRDSARNPHTLVEVTSFAAINKFQPFNVAVSSNVLFLLDFHCHLTR
                     SEVVGYLGGRWDINNQMLTVLRAFPCRSRLGDPDTAATVEEEIHQVLFLRGLSLVGWY
                     HSHPHSPAAPSLQDIDAQMEYQLRLQGSNNGFQPCLALLCSPYYSGNPGPESKICPFW
                     VMPPPEQRPSDYGIPMDVEMAYVQDSFLTNDVLQEMMMLVEFYKGAPDLVKFQEAWSP
                     EHTYLDKLKMSLASRTPKDQGMCHVLEQVCSVLKQGS"
     exon            29..285
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            286..522
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            523..646
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            647..728
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            729..825
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            826..898
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            899..975
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            976..1144
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            1145..1215
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            1216..1305
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            1306..1398
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
     exon            1399..1546
                     /gene="Mpnd"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgtgcaggg acacagcggc catggcagct cccgagtctc tgtcctccac ggccacggcc
       61 gaggaggcgc cggaggagga tgaggacgag gcggagaccg aggacccgga gcgcgggacg
      121 ggtagcggag ggcgcagcgg cagcctcggt ggcagcggag gcagcacggc agggcctggg
      181 ttggccctag ggggcgcgct cacgaggcgc gcggtcacgc tgcgggtgct gctcaaagac
      241 gagctgctgg agcccggtga gggggtgcta tccatctact acctgggcag gaagtttatc
      301 ggggacctga aactagatgg caggatcgtg tggcaggaaa atggacaagt cttcaactcg
      361 cccagcgcct gggccacaca ctgcaagaag cttgtcaacc cagccaagaa gtctggctgt
      421 ggctgggcct ctgtcaagta caagggccag aagctggaca aatacaaggc cgcttggctc
      481 cgccgtcacc agctacatat gcccgtagct gctgctgatg agagtcccac cagtgaaggg
      541 gaggaggagg aactgctgct ggaggaggag gaggaggatg tgctggctgg ggtttcatca
      601 gaatacaaag gccacagacc tcctgggaag ggttccttgg agccagaagc cacaccccca
      661 gggaaacgtg tggacaaggt ccgggtgccc gtccgttact gcatgctggg cagcagagat
      721 tctgccagga acccccacac tctggtagaa gtaacatcct tcgctgccat caacaagttc
      781 cagccattca acgtggccgt ttccagtaat gtgctgttcc tcttggactt ccactgtcac
      841 ctgactcgga gtgaggtcgt gggctacctt ggtggtcgct gggacatcaa taatcagatg
      901 ctgaccgtgc tgagagcctt cccctgcagg agtcggctag gggaccctga tactgcagcc
      961 acggttgagg aggagatcca ccaggtcctg ttcctgcgag gcctgtccct ggtgggctgg
     1021 taccacagcc acccacacag ccctgcagca ccctccttgc aggacatcga tgcacagatg
     1081 gagtaccagt tgagactgca aggctccaac aatggcttcc agccctgcct ggccctgctg
     1141 tgctccccct actactccgg caacccaggc cctgagtcca agatctgccc tttctgggtg
     1201 atgcctcccc ctgagcaaag gcccagtgac tatggaatcc ccatggatgt agagatggcg
     1261 tatgtccaag atagcttcct gaccaacgat gttcttcagg agatgatgat gctggtggag
     1321 ttctacaaag gtgcccctga ccttgtgaag ttccaagagg cctggagccc agagcatacc
     1381 tacctggaca agctcaagat gtccttggcc agcaggaccc cgaaggacca gggcatgtgc
     1441 cacgtgctgg agcaggtctg cagcgtgctc aagcagggga gctgaggctg taagctttgc
     1501 tgtcctggga caggctgggt aataaagtct ctgagtgcct acagcaaaaa aaaaaaaaaa
     1561 aaaaaa
//
