LOCUS       NM_001395628            4056 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus MORC family CW-type zinc finger 3 (Morc3), mRNA.
ACCESSION   NM_001395628 XM_006248060
VERSION     NM_001395628.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4056)
  AUTHORS   Takahashi,K., Yoshida,N., Murakami,N., Kawata,K., Ishizaki,H.,
            Tanaka-Okamoto,M., Miyoshi,J., Zinn,A.R., Shime,H. and Inoue,N.
  TITLE     Dynamic regulation of p53 subnuclear localization and senescence by
            MORC3
  JOURNAL   Mol Biol Cell 18 (5), 1701-1709 (2007)
   PUBMED   17332504
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Jul 22, 2021 this sequence version replaced XM_006248060.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383, SAMEA5760386
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-113               JAXUCZ010000011.1  46621692-46621804
            114-186             JAXUCZ010000011.1  46630014-46630086
            187-319             JAXUCZ010000011.1  46632703-46632835
            320-534             JAXUCZ010000011.1  46633662-46633876
            535-682             JAXUCZ010000011.1  46635501-46635648
            683-830             JAXUCZ010000011.1  46637330-46637477
            831-959             JAXUCZ010000011.1  46640296-46640424
            960-1079            JAXUCZ010000011.1  46641033-46641152
            1080-1177           JAXUCZ010000011.1  46642723-46642820
            1178-1282           JAXUCZ010000011.1  46648103-46648207
            1283-1405           JAXUCZ010000011.1  46650479-46650601
            1406-1480           JAXUCZ010000011.1  46650707-46650781
            1481-1535           JAXUCZ010000011.1  46653429-46653483
            1536-1699           JAXUCZ010000011.1  46655138-46655301
            1700-2588           JAXUCZ010000011.1  46658156-46659044
            2589-2746           JAXUCZ010000011.1  46660802-46660959
            2747-4056           JAXUCZ010000011.1  46663006-46664315
FEATURES             Location/Qualifiers
     source          1..4056
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q11"
     gene            1..4056
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /note="MORC family CW-type zinc finger 3"
                     /db_xref="GeneID:304074"
                     /db_xref="RGD:1307924"
     exon            1..113
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..2900
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /note="zinc finger, CW-type with coiled-coil domain 3;
                     microrchidia 3"
                     /codon_start=1
                     /product="MORC family CW-type zinc finger protein 3"
                     /protein_id="NP_001382557.1"
                     /db_xref="GeneID:304074"
                     /db_xref="RGD:1307924"
                     /translation="MAVQPPTGIRLSALCPKFLHTNSTSHTWPFSAVAELIDNAYDPD
                     VNAKQIWIDKTVISDHICLTFTDNGNGMTADKLHKMLSFGFSDKVTVNGHVPVGLYGN
                     GFKSGSMRLGRDAMVFTKNGDTMSVGFLSQTYLEVIKAEHVVVPIVTFNKHRQMIYLT
                     ESKASLAAMLEHSLFSTEQKLLAELDAIMGKKGTRIIIWNLRSYKNATEFDFEKDKYD
                     IRIPEDLDEVAGKKGYKKQERMDQIAPESDYSLRAYCSILYLKPRMQIIIRGQKVKTQ
                     LVSKSLAYIERDVYRPKFLTKTVRITFGFNCRNKDHYGIMMYHKNRLIKAYEKVGCQL
                     KANNMGVGVVGVIECNFLKPTHNKQDFDYTNEYRLTILALGEKLNDYWNEMKVKKNSE
                     YPLNLPVEDIQKRPDQTWVQCDACLKWRKLPDGIDQLPEKWYCSNNPDPQFRNCEVPE
                     EPEDEDLVHPTYEKTYKKTKEKFRIRQPEMLPRILPRINHEIVYQTSVSSPSFSPVKE
                     SVPRPHISEVASPFAARIINNHLVSAQPEPESNSLKRRLSVRSSILNAKTRRLSNPPI
                     ENSSYKNDDDEDVIILEENSTPKPAVDLDVRSDIEVKSEQSHAEQTGIEVELVSSPQP
                     GVQASSTSTATSRCDQGTAASTQTEAPGLMVKKEESMEEDMDVRNGRAALSCVSAEVK
                     VQETSAESADAAGHQLQELRSELLLVTQERDDYKRKCQVFADQIQVLQRRLLEMNDQC
                     VKKEMCHQSTEMDAVFLLGSVNGQSESPGHVGSQYQQALEEIERLKKQCSALQHVKGE
                     CSQSSCTESKSEMDEMAVQLDDVFRQLDKCTIERDQYRSEVQLLEMEKSHMHSRCEEL
                     KTEVEQLKSTSQQAGADVSTSSSAEEAVSYVDGESLKLRSLRVNVGQLLAMIVPDLDL
                     QQVNYDVDVVDEILGQVVEQMSEISSS"
     exon            114..186
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            187..319
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            320..534
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            535..682
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            683..830
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            831..959
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            960..1079
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1080..1177
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1178..1282
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1283..1405
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1406..1480
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1481..1535
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1536..1699
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1700..2588
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            2589..2746
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
     exon            2747..4056
                     /gene="Morc3"
                     /gene_synonym="Zcwcc3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaacccgtcg cggactccta gcctcccagt cgggctgcgg ccgaggccgg tcctggcttt
       61 gtagcttact caagatggcg gtgcagccac ccaccgggat ccgcctcagc gcgctttgcc
      121 cgaagttttt acatacaaat tctactagtc atacttggcc cttcagtgca gtcgctgaat
      181 taatagataa tgcttatgat cctgatgtga atgctaaaca gatctggatt gataagacag
      241 tgattagtga ccatatatgc ttgacattca ctgacaacgg caacgggatg acagcagaca
      301 agttacataa aatgctaagc tttggcttca gtgacaaagt caccgtgaat ggtcatgtcc
      361 cagttggact atacgggaat ggcttcaagt cagggtctat gcgactaggc agagatgcaa
      421 tggtttttac caaaaatgga gataccatga gtgtgggctt cttgtctcag acctacctgg
      481 aagtcataaa ggcggagcat gttgttgtcc caattgtgac attcaacaaa caccgtcaga
      541 tgatttattt aacagagtca aaagcaagct tagcagcgat gctggaacat tccctgtttt
      601 ctacagaaca gaaattactg gcagaactcg atgctatcat gggtaagaag gggacaagaa
      661 tcatcatttg gaaccttaga agttacaaaa atgcaacaga atttgatttt gaaaaggata
      721 aatatgacat cagaattcct gaggatttag atgaggtagc agggaagaaa gggtacaaga
      781 aacaagagag aatggaccaa attgcccctg agagtgacta ttccttaagg gcttactgca
      841 gtattttata ccttaaaccg aggatgcaga tcatcatacg tggacagaaa gtgaagacac
      901 agctggtttc aaaaagcctt gcctatattg aacgtgatgt ttaccgacct aagtttttaa
      961 ctaaaacagt aagaattact tttggattca actgcagaaa taaagatcac tatgggataa
     1021 tgatgtatca caaaaataga ctcatcaagg cttatgaaaa agtaggatgc cagttaaagg
     1081 caaacaacat gggtgttgga gtggttggag ttatagaatg taatttcctt aagccgactc
     1141 ataataagca agattttgac tacactaatg agtacaggct tacaatacta gcactaggag
     1201 aaaagctgaa tgattattgg aatgaaatga aagtgaaaaa gaattcagag taccctctaa
     1261 acttgcccgt tgaagacata cagaagcgtc ctgatcagac atgggttcaa tgtgacgctt
     1321 gtctaaagtg gcgaaagtta ccagacggga tagaccaact tccagaaaaa tggtattgct
     1381 ccaataaccc tgacccacag ttcagaaatt gtgaagttcc agaagaacct gaagatgagg
     1441 atttggtaca tcctacttat gagaaaacct acaaaaagac caaggagaaa ttcaggatca
     1501 gacaaccgga aatgctccct cgaatactcc ctcggattaa tcatgagata gtgtatcaga
     1561 caagtgtttc aagtccaagc ttctccccgg tgaaggaaag tgttccaaga ccacatattt
     1621 ctgaagtcgc gagtcccttt gcagcaagga tcataaataa ccaccttgtt tcagcccagc
     1681 ctgagcctga gagcaacagc ttgaagcgga ggcttagtgt tcgttcgtca attctgaatg
     1741 caaagactcg gagattaagc aatcctccaa ttgaaaattc atcttacaaa aatgatgatg
     1801 atgaagatgt catcattttg gaagaaaata gcacccccaa acctgcagtg gatcttgacg
     1861 ttagatcaga tattgaagtt aagtcagagc agagccacgc tgagcagact ggcattgagg
     1921 ttgaacttgt aagcagtcct cagcctggtg tccaggccag ttccacaagc accgccacct
     1981 ctaggtgtga ccagggcact gccgcctcca ctcagacaga agcaccaggc ctgatggtga
     2041 aaaaggaaga aagtatggag gaggacatgg atgtgaggaa cggcagagct gccctgtcct
     2101 gtgtcagtgc tgaagtgaaa gtgcaggaga cctcggctga gtcagcagat gctgctgggc
     2161 atcagttaca agaactgaga agtgagctgc ttttagtcac acaagaaaga gatgattaca
     2221 agagaaagtg tcaggtgttt gctgaccaga tacaagtgtt gcagcgaaga ctgttggaga
     2281 tgaacgacca atgcgtgaag aaggagatgt gccaccagtc tactgagatg gacgcagtgt
     2341 ttctgctcgg aagtgttaat ggtcagtctg aaagcccagg ccacgtgggg tctcagtatc
     2401 agcaagcact ggaggaaata gaaaggctga agaaacagtg cagcgctctg cagcacgtga
     2461 agggtgagtg cagccagtct tcctgcactg agagcaaaag cgagatggac gagatggccg
     2521 tgcaactcga cgacgtgttc cggcagctgg acaagtgcac tattgagagg gaccagtaca
     2581 ggagcgaggt tcagttactg gaaatggaga aatcacatat gcattctcgg tgtgaagagc
     2641 tcaagactga agttgaacag ttgaagtcta caagtcaaca ggcaggagca gatgtttcaa
     2701 cttcaagcag tgctgaggaa gctgtcagtt atgtggatgg tgaaagcctc aaacttcgtt
     2761 ctcttcgtgt caacgtagga cagctgctgg ctatgattgt gcctgatctg gatcttcagc
     2821 aagtcaatta tgacgtggat gtagtggatg agattctagg acaagtggtt gaacaaatga
     2881 gtgagatcag cagctcttga gtgcagacat ctggtgtggg ttccactttc cgtgtaaagt
     2941 gctaggtcac agactgaaga gccgtacctt tctgtattct atgcattcta gtgtcacagg
     3001 cactgtgcac acacaatctg gacatacatg tccccgtgaa ttgctggtac tgagcagcag
     3061 aattggctaa cttagcttct gttctgaatg taaatatttg tattaagtcc atacatattt
     3121 ttttattgcc ctagagactg gtgtttttca ccaagagctt ttcaggttgt tactacagtt
     3181 tgtgaaattt ttctggctcc ctaaaaatgt atttttctca aaattgaggg ctgtgccata
     3241 atgtaaatgg atatgttgct actgttgttt tcttaaatga gcataaggca ggtgttgaga
     3301 taatgtaatg gcactcctgc cggggtctgc ttgtaagaga gtagagcgtt ccttctgttt
     3361 gctatgaagg cctgtctctg aaataattct gttcatagag aggaaagcca aagctagctg
     3421 catttgcctg gctttttctt gtgctgagat tgctaattgt caagtaaaag gtgttttcca
     3481 ggacaaagaa aggatcttta aagtgttaaa aatatccagt gacaaccatg tttactttga
     3541 agcccatttt tggctgttga ttcagcatga agtgggcaca ataattattt gagatttctt
     3601 tttgtgaaat ttcctgtaca gcctttgtag ggttaacgta agctgagaag gcggtcttcc
     3661 tcaaacagta ctgcatatct ttactgtatt atgaatgtaa gtgtttttta gcctggagtt
     3721 aatcataagg acctgggatc atagcaccac atgctgtaaa atatgctttt actggtccca
     3781 agttttgtgc aatctgaaaa gaggtggctt tttattatat atgtaactgt atataattaa
     3841 gaatcatatt ttccacaact aaaatgtgtt attttttcca aagttttatt gttgctattt
     3901 attattttaa cttttgtttc tgaaaattca gtacatactc attttgtgtg tgtggtatat
     3961 acatatatac actcagttgt atatgaaatt gaatctttat gtatattacc ttctggaaat
     4021 tgcaaataaa tgaagttctt gtttttattt aattga
//
