LOCUS       NM_001172090            3036 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus MORC family CW-type zinc finger 1 (Morc1), mRNA.
ACCESSION   NM_001172090
VERSION     NM_001172090.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Mundorf,A., Koch,J., Kubitza,N., Wagner,S.C., Schmidt,M., Gass,P.
            and Freund,N.
  TITLE     Morc1 as a potential new target gene in mood regulation: when and
            where to find in the brain
  JOURNAL   Exp Brain Res 239 (10), 2999-3005 (2021)
   PUBMED   34331083
  REMARK    GeneRIF: Morc1 as a potential new target gene in mood regulation:
            when and where to find in the brain.
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Schmidt,M., Brandwein,C., Luoni,A., Sandrini,P., Calzoni,T.,
            Deuschle,M., Cirulli,F., Riva,M.A. and Gass,P.
  TITLE     Morc1 knockout evokes a depression-like phenotype in mice
  JOURNAL   Behav Brain Res 296, 7-14 (2016)
   PUBMED   26275923
REFERENCE   3  (bases 1 to 3036)
  AUTHORS   Pastor,W.A., Stroud,H., Nee,K., Liu,W., Pezic,D., Manakov,S.,
            Lee,S.A., Moissiard,G., Zamudio,N., Bourc'his,D., Aravin,A.A.,
            Clark,A.T. and Jacobsen,S.E.
  TITLE     MORC1 represses transposable elements in the mouse male germline
  JOURNAL   Nat Commun 5, 5795 (2014)
   PUBMED   25503965
  REMARK    Erratum:[Nat Commun. 2015;6:7604. PMID: 26159654]
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 3036)
  AUTHORS   Inoue,N., Hess,K.D., Moreadith,R.W., Richardson,L.L., Handel,M.A.,
            Watson,M.L. and Zinn,A.R.
  TITLE     New gene family defined by MORC, a nuclear protein required for
            mouse spermatogenesis
  JOURNAL   Hum Mol Genet 8 (7), 1201-1207 (1999)
   PUBMED   10369865
REFERENCE   5  (bases 1 to 3036)
  AUTHORS   Watson,M.L., Zinn,A.R., Inoue,N., Hess,K.D., Cobb,J., Handel,M.A.,
            Halaban,R., Duchene,C.C., Albright,G.M. and Moreadith,R.W.
  TITLE     Identification of morc (microrchidia), a mutation that results in
            arrest of spermatogenesis at an early meiotic stage in the mouse
  JOURNAL   Proc Natl Acad Sci U S A 95 (24), 14361-14366 (1998)
   PUBMED   9826705
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000011.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-151               JAXUCZ010000011.1  65847107-65847257   c
            152-205             JAXUCZ010000011.1  65839183-65839236   c
            206-240             JAXUCZ010000011.1  65834253-65834287   c
            241-309             JAXUCZ010000011.1  65830181-65830249   c
            310-400             JAXUCZ010000011.1  65822319-65822409   c
            401-509             JAXUCZ010000011.1  65821560-65821668   c
            510-669             JAXUCZ010000011.1  65819010-65819169   c
            670-775             JAXUCZ010000011.1  65792229-65792334   c
            776-901             JAXUCZ010000011.1  65779678-65779803   c
            902-981             JAXUCZ010000011.1  65764401-65764480   c
            982-1052            JAXUCZ010000011.1  65763031-65763101   c
            1053-1117           JAXUCZ010000011.1  65755903-65755967   c
            1118-1261           JAXUCZ010000011.1  65743234-65743377   c
            1262-1416           JAXUCZ010000011.1  65737591-65737745   c
            1417-1545           JAXUCZ010000011.1  65714797-65714925   c
            1546-1651           JAXUCZ010000011.1  65705152-65705257   c
            1652-1790           JAXUCZ010000011.1  65701292-65701430   c
            1791-1859           JAXUCZ010000011.1  65684208-65684276   c
            1860-2105           JAXUCZ010000011.1  65678026-65678271   c
            2106-2210           JAXUCZ010000011.1  65675411-65675515   c
            2211-2280           JAXUCZ010000011.1  65659350-65659419   c
            2281-2347           JAXUCZ010000011.1  65656475-65656541   c
            2348-2497           JAXUCZ010000011.1  65653255-65653404   c
            2498-2585           JAXUCZ010000011.1  65649070-65649157   c
            2586-2639           JAXUCZ010000011.1  65647369-65647422   c
            2640-2834           JAXUCZ010000011.1  65644754-65644948   c
            2835-3036           JAXUCZ010000011.1  65641786-65641987   c
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q21"
     gene            1..3036
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /note="MORC family CW-type zinc finger 1"
                     /db_xref="GeneID:360712"
                     /db_xref="RGD:1565610"
     exon            1..151
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..2963
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /note="microrchidia 1"
                     /codon_start=1
                     /product="MORC family CW-type zinc finger protein 1"
                     /protein_id="NP_001165561.1"
                     /db_xref="GeneID:360712"
                     /db_xref="RGD:1565610"
                     /translation="MDKYALLQRAKLHLDFIHANSTTHSFLFGALAELLDNARDAGAV
                     RLDVFSVDNGTLQGGFMLCFLDDGCGMSPDEASDIIYFGTSKKRLSTLKFIGQYGNGL
                     KSGSMRIGKDCILFTKKEETMTCLFFSQTFCEKEGLTEVVVPIPSWLTRTRESITDDT
                     QKFSTELSIIYKYSPFKTEAELMQQFDMIYGRCGTLLIIYNLKLLLSGEPELDVTTDK
                     EDILMAEALEEFPERRSFRAYTAVLYFEPRMRIFIQAKRVQTKHLCYSLYKPRKYQYT
                     TSSFKGKFKTEVKKAEEAVKMAELLFKEVQAKVNQPDRIVLSSAKDVIQKALEDVEAK
                     HKDLRQKQRALRKAKTLSLFFGVHTEDRSQAGMFIYSNNRLIKMYEKVGPQLKMKSLL
                     GAGVIGIVNIPLEIMEPSHNKQEFLNVQEYNHLLKVMGQYLIQYCKDTGISNRNLTLF
                     WNKFEDQHSKDTDSSLEALQWRRRQAMAIPFILQCDLCLKWRVLPSSSSYQGKGFPDI
                     WICANNPNNLENSCNQVECLPSIPLGTMNRRPPAKDEREKQLQESVQRYRDRLVDTQP
                     QKSQLIVTSKIPEFKTSCLSSAHKEKSRLGRIKPPEDDLTQGSPSSAELSFNQRSQKR
                     STEDADSDVEFVCVTKIPKKSAKKNLKCLQPSHSPAMLENLKLEDTAQVSSREMKRRQ
                     SENLVQERKAFTQVEASSRDPTVTVVWDKSSTKVSPKQEKEEVALAKTDKQELCDDAP
                     IVKRNSSALNWKSLTGVQMEDLSPHSGHKVSSVNSDCQLLSSLMPSRSTSVEETARKL
                     LSKLREILLYFVPEFQLSSEFECTSVEELITNPELERCPESINEKLKTCFKQIQNIYM
                     AQYEKRLKRKMQSIIYEANRRVTLNEVLLEQCELKRKRTEEKLSDLCAKLALLLQKLQ
                     LGGPVRDFQQIDTYLEDLLKEDHLSTTLNKRSLESGQVKGAEH"
     exon            152..205
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            206..240
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            241..309
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            310..400
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            401..509
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            510..669
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            670..775
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            776..901
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            902..981
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            982..1052
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            1053..1117
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            1118..1261
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            1262..1416
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..1545
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            1546..1651
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            1652..1790
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            1791..1859
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            1860..2105
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            2106..2210
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            2211..2280
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            2281..2347
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            2348..2497
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            2498..2585
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            2586..2639
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            2640..2834
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
     exon            2835..3036
                     /gene="Morc1"
                     /gene_synonym="Morc; RGD1565610"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgtggtcgtg gatgtaggtg tggacgtggg ccaacagttt ccgattaggc atcaggctct
       61 tctggtgtcc tcaggtcgag cttgaagaca tggacaagta tgccttgctg cagagggcaa
      121 aactgcatct ggatttcatc cacgcaaact ccacaactca cagtttcctc tttggagcac
      181 tggctgagtt gctggacaat gcaagagatg ctggggctgt aagactcgat gtgttttcag
      241 tggataacgg aacactgcag ggaggattca tgttgtgttt cctggatgac ggatgtggca
      301 tgagccctga tgaagcttca gacatcattt actttggaac atccaagaaa cggttgtcaa
      361 ccttgaagtt catcgggcaa tatggcaatg ggctgaagag cggctccatg agaattggca
      421 aagactgtat tcttttcaca aagaaggaag agaccatgac ctgtctgttc ttctctcaga
      481 ctttctgtga aaaagaaggt ctcactgagg ttgtagttcc aataccttca tggctcacga
      541 gaacaagaga gagtatcacc gatgacacac agaagttctc cacggaattg tccatcattt
      601 acaaatactc cccatttaaa actgaagctg aattgatgca gcagtttgac atgatctacg
      661 ggagatgtgg aactttgctg attatttata acttgaagct actgcttagt ggagaaccag
      721 agttggatgt tacaactgac aaagaggata tactgatggc cgaggctctg gaggaatttc
      781 cagagagacg gtcattcaga gcctacacag ctgttctgta ttttgaaccc cggatgagaa
      841 tatttattca ggccaaaaga gttcagacaa agcacctatg ttattccctc tacaaaccca
      901 gaaagtacca atatactacg tcttctttca aagggaagtt taaaactgaa gttaaaaagg
      961 cagaagaagc agtcaagatg gccgaactac tgtttaaaga ggtgcaagcc aaagtaaacc
     1021 agcctgacag aattgtgttg tcttctgcca aggatgtaat acagaaagct ctggaagatg
     1081 tggaagcaaa gcataaagat cttcgccaaa aacagagggc actaaggaaa gcaaaaactc
     1141 tctctctgtt ctttggagtg cacacagaag accgaagcca agctggaatg ttcatttaca
     1201 gtaataaccg attgatcaaa atgtatgaga aggttggtcc ccagctgaaa atgaaatcat
     1261 tacttggcgc aggtgtgatt ggaattgtga acataccctt ggagatcatg gaaccatccc
     1321 ataataaaca agaattcctc aatgtccaag aatataacca tctactaaaa gtcatgggac
     1381 agtacttgat ccagtactgt aaggacactg ggattagtaa tagaaaccta acactgtttt
     1441 ggaacaaatt cgaagaccag catagcaaag acacagacag ctctttagag gctctgcaat
     1501 ggcgaaggag acaagccatg gctatcccat tcatcctaca gtgtgatctt tgtctcaaat
     1561 ggagagtcct gccttcctct tccagttacc aaggaaaagg atttcctgac atatggatct
     1621 gcgccaataa tcccaacaac ctggaaaaca gctgtaacca ggtagaatgc ctgccttcta
     1681 tcccattggg caccatgaac agaagaccac cagcaaaaga tgagagagag aagcaacttc
     1741 aagaatcagt ccagagatat cgggacaggc tggtggatac acagccacag aagtcccaac
     1801 ttatagtaac aagcaagatc cccgagttca agacctcctg cctttcctca gcacacaagg
     1861 aaaaatccag actcgggaga atcaagcctc cagaggatga cctaactcag ggcagtcctt
     1921 catctgctga gctttcgttc aaccaaagaa gccaaaagag aagcacagag gatgctgact
     1981 ctgatgtgga gttcgtctgc gtgactaaga ttccgaagaa gtctgcaaag aagaatttga
     2041 agtgtctgca gcctagtcac tcgccagcaa tgttggaaaa cctcaaactt gaggacacag
     2101 cccaggtttc ttcacgggaa atgaaaagga ggcagagtga aaaccttgtg caggaacgca
     2161 aggcattcac tcaagttgaa gctagcagca gagatccaac tgtaactgtg gtttgggata
     2221 aaagcagcac caaggtctca ccgaaacaag aaaaagagga agtagccctg gcaaagacag
     2281 acaaacaaga gctgtgtgat gatgctccaa tagtgaaaag aaattcttca gcacttaact
     2341 ggaaaagctt gaccggagta caaatggaag atttaagtcc acattctgga cacaaagtca
     2401 gctctgtgaa tagtgattgt cagctgctct cttcattgat gccttctcga agcacgtctg
     2461 tggaggaaac agcaagaaaa ctgctgtcta aattaaggga gattcttctg tattttgttc
     2521 ctgagtttca actatcatct gaatttgagt gcacatctgt ggaagaactc ataacaaatc
     2581 ctgagctgga gcgatgccca gagagtataa atgaaaagct aaaaacgtgt ttcaaacaga
     2641 tccagaatat ctacatggct caatatgaga aaagactcaa gagaaaaatg cagtctatta
     2701 tctatgaggc aaacagacgg gtgacactca atgaagtttt actggaacag tgtgaactga
     2761 aaaggaagag gactgaggag aaactcagtg acctctgtgc aaagcttgcc ttgctgctgc
     2821 agaaacttca gctgggtggt ccagtgcgag acttccagca gattgatact tacttagaag
     2881 atttgcttaa agaagatcat ctctcaacca ctttaaataa acggtctcta gagtcagggc
     2941 aagtgaaagg tgcagaacac tgagagggtt agctcaaaag tcagaaaagg tgtttcttct
     3001 taaaactgct aataagaaaa aaaggaacat tctttt
//
