LOCUS       NM_001126284            2043 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus MON1 homolog A, secretory trafficking associated
            (Mon1a), mRNA.
ACCESSION   NM_001126284 XM_001074544 XM_006243783 XM_236627
VERSION     NM_001126284.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Vaites,L.P., Paulo,J.A., Huttlin,E.L. and Harper,J.W.
  TITLE     Systematic Analysis of Human Cells Lacking ATG8 Proteins Uncovers
            Roles for GABARAPs and the CCZ1/MON1 Regulator C18orf8/RMC1 in
            Macroautophagic and Selective Autophagic Flux
  JOURNAL   Mol Cell Biol 38 (1), e00392-17 (2017)
   PUBMED   29038162
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Gerondopoulos,A., Langemeyer,L., Liang,J.R., Linford,A. and
            Barr,F.A.
  TITLE     BLOC-3 mutated in Hermansky-Pudlak syndrome is a Rab32/38 guanine
            nucleotide exchange factor
  JOURNAL   Curr Biol 22 (22), 2135-2139 (2012)
   PUBMED   23084991
REFERENCE   3  (bases 1 to 2043)
  AUTHORS   Wang,F., Paradkar,P.N., Custodio,A.O., McVey Ward,D., Fleming,M.D.,
            Campagna,D., Roberts,K.A., Boyartchuk,V., Dietrich,W.F., Kaplan,J.
            and Andrews,N.C.
  TITLE     Genetic variation in Mon1a affects protein trafficking and modifies
            macrophage iron loading in mice
  JOURNAL   Nat Genet 39 (8), 1025-1032 (2007)
   PUBMED   17632513
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On or before Jun 3, 2021 this sequence version replaced
            XM_006243783.4, NM_001126284.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161958.1, SRR26643299.37107.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-237               JAXUCZ010000008.1  117452946-117453182
            238-377             JAXUCZ010000008.1  117467628-117467767
            378-863             JAXUCZ010000008.1  117468651-117469136
            864-1629            JAXUCZ010000008.1  117469860-117470625
            1630-1777           JAXUCZ010000008.1  117471273-117471420
            1778-2043           JAXUCZ010000008.1  117471514-117471779
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..2043
                     /gene="Mon1a"
                     /gene_synonym="RGD1308823"
                     /note="MON1 homolog A, secretory trafficking associated"
                     /db_xref="GeneID:315999"
                     /db_xref="RGD:1308823"
     exon            1..237
                     /gene="Mon1a"
                     /gene_synonym="RGD1308823"
                     /inference="alignment:Splign:2.1.0"
     exon            238..377
                     /gene="Mon1a"
                     /gene_synonym="RGD1308823"
                     /inference="alignment:Splign:2.1.0"
     CDS             251..1918
                     /gene="Mon1a"
                     /gene_synonym="RGD1308823"
                     /note="MON1 secretory trafficking family member A"
                     /codon_start=1
                     /product="vacuolar fusion protein MON1 homolog A"
                     /protein_id="NP_001119756.2"
                     /db_xref="GeneID:315999"
                     /db_xref="RGD:1308823"
                     /translation="MAADMPRKRSGECPEGTLAPSTGQSVERAESPTPGLTQGMEPGA
                     GQEGAMFVHTRSYEDLTELEDREASGDSPKEYVGSPPPLPTDIRQISQDFSELSTQLT
                     GVARDLQEEMLPGSSEDWLEPQGAAGRPATEPSQESSTEGEEEDATEAWRLHQKHVFV
                     LSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLV
                     LVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSGSERITD
                     NLLQLMARDPSFLMGAARCLPLAAAVRDTVSASLQQARVRSLVFSILLARNQLVALVR
                     RKDQFLHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFHAHISYLEPDTDLC
                     LLLVSTDREDFFAVSDCRRRFLERIRKRGAHLALREALRTPYYSVAQVGIPDLRHFLY
                     KSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYYTGPNENLLA
                     WVTGAFELYLCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY"
     exon            378..863
                     /gene="Mon1a"
                     /gene_synonym="RGD1308823"
                     /inference="alignment:Splign:2.1.0"
     exon            864..1629
                     /gene="Mon1a"
                     /gene_synonym="RGD1308823"
                     /inference="alignment:Splign:2.1.0"
     exon            1630..1777
                     /gene="Mon1a"
                     /gene_synonym="RGD1308823"
                     /inference="alignment:Splign:2.1.0"
     exon            1778..2043
                     /gene="Mon1a"
                     /gene_synonym="RGD1308823"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggggcctcc gccaccagag gccggtgaaa gctgtcttcc tgcgccggtg gccggtaaag
       61 ggtcggcagg agagatcagt tcctccgctg tggtcatgtc tgtattctcc aggggcggta
      121 gccccacgaa gttgtaccct aaggccaggc acggctggac actcacatct ccccagggga
      181 ctggcagagg gcagtgactg gcacccttgg taggtcctgt gttcccccaa gaaacaggac
      241 agcccagaag atggctgctg acatgccgag gaagagaagc ggcgaatgcc ccgagggcac
      301 actggctcct tccaccggcc aaagtgtgga aagagctgag agccccacac cagggctgac
      361 ccagggaatg gagccaggtg ctgggcagga gggtgcaatg ttcgtccata cacgttccta
      421 tgaagacctg acagagttag aagataggga agcttctggg gacagcccca aagagtatgt
      481 tgggagtccc ccaccactgc ctacagacat acgccagatt agccaggact tcagcgaact
      541 aagcacccag ctgacaggtg tggcccgaga cctgcaggag gaaatgctgc caggaagctc
      601 tgaagactgg ctggaacccc agggggcggc tggacgacca gccacagagc cctcccaaga
      661 gagctcaact gaaggggaag aggaggatgc cacagaggca tggcgtctcc accagaagca
      721 cgtatttgta ctgagtgagg cagggaagcc tgtgtattct cgctatgggt ctgaggaagc
      781 gctttccagc actatgggtg tcatggttgc cttggtgtcc ttcctggagg cagacaagaa
      841 tgccatccgc tccatccatg cagatggcta caaggtagta ttcgtgcgcc ggagccctct
      901 ggtgctggtg gcggtggccc gcacgcggca gtcggcccag gagctggcgc aggagctact
      961 gtacatctac taccagattc tgagcctcct taccggcgcg cagctgagcc acatcttcca
     1021 gcagaagcag aactacgacc tgcggcgcct gctctcgggc tcggagcgga tcaccgataa
     1081 cctgctgcag ctaatggctc gagaccccag tttcctgatg ggtgcggcga ggtgcctgcc
     1141 tttggcagcg gccgtgcggg acacggtgag tgccagcctg cagcaggcgc gtgttcgcag
     1201 cctggtcttt tccatcctgc tggcccgcaa ccagctagtg gcgctcgtgc gccgcaagga
     1261 ccaattcctg catcccatcg acctgcacct gcttttcaac ctcattagct cctcctcatc
     1321 cttccgtgag ggcgaggctt ggactcccgt gtgcctgcca aagttcaatg cggccggctt
     1381 cttccacgca cacatctctt acctagaacc cgacaccgac ctctgcctgc tgctggtctc
     1441 cactgaccgt gaggacttct tcgcagtctc tgactgtcgt cgccgcttcc tggaacgcat
     1501 tcgaaagcgg ggagcccatt tggccctgcg ggaggcgctg cgcacacctt actacagcgt
     1561 ggcccaagta ggcatccctg accttcgcca cttcctctat aaatcaaaga gctcaggact
     1621 cttcaccagt ccggagattg aggccccata caccagtgaa gaggagcagg agcggctgtt
     1681 gggcctctac cagtacctgc acagccgtgc ccacaatgcc tcccgcccac tcaagaccat
     1741 ctactacaca ggccccaatg agaacctcct agcctgggtg acaggtgcct ttgagctcta
     1801 cttgtgctac agcccactgg gaaccaaggc atcagccgtc agtgccatcc ataagctgat
     1861 gcgctggatc cgtaaagagg aagaccggct cttcatcctc acgcccctca cctactgacg
     1921 gaagtgggaa ggcacactgg gcatgggaag ccatgggagc ctccaggtga ggccggcttc
     1981 ctctgcccag ccagcaggca gggaccgtgg gctggtgcgt gcattaaagt gcattggaaa
     2041 gac
//
