LOCUS       NM_053606               1275 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus matrix metallopeptidase 23 (Mmp23), mRNA.
ACCESSION   NM_053606
VERSION     NM_053606.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ohnishi,J., Ohnishi,E., Jin,M., Hirano,W., Nakane,D., Matsui,H.,
            Kimura,A., Sawa,H., Nakayama,K., Shibuya,H., Nagashima,K. and
            Takahashi,T.
  TITLE     Cloning and characterization of a rat ortholog of MMP-23 (matrix
            metalloproteinase-23), a unique type of membrane-anchored matrix
            metalloproteinase and conditioned switching of its expression
            during the ovarian follicular development
  JOURNAL   Mol Endocrinol 15 (5), 747-764 (2001)
   PUBMED   11328856
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Velasco,G., Pendas,A.M., Fueyo,A., Knauper,V., Murphy,G. and
            Lopez-Otin,C.
  TITLE     Cloning and characterization of human MMP-23, a new matrix
            metalloproteinase predominantly expressed in reproductive tissues
            and lacking conserved domains in other family members
  JOURNAL   J Biol Chem 274 (8), 4570-4576 (1999)
   PUBMED   9988691
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086586.1.
            
            On Jun 10, 2007 this sequence version replaced NM_053606.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086586.1, AB010960.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16093044, SAMN16676806
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1275
                     /gene="Mmp23"
                     /note="matrix metallopeptidase 23"
                     /db_xref="GeneID:94339"
                     /db_xref="RGD:620201"
     exon            1..167
                     /gene="Mmp23"
                     /inference="alignment:Splign:2.1.0"
     CDS             15..1190
                     /gene="Mmp23"
                     /note="MIFR; MMP-23; metaloprotease in the female
                     reproductive tract; Matrix metalloproteinase 23;
                     metalloprotease in the female reproductive tract"
                     /codon_start=1
                     /product="matrix metalloproteinase-23"
                     /protein_id="NP_446058.1"
                     /db_xref="GeneID:94339"
                     /db_xref="RGD:620201"
                     /translation="MGWRACLRPEASGAVQGRWLGAVLSGLCLLSALAFLEWLGSPTE
                     TAWNAAQGNVDAPDVGGSTPQVPSLLSMLVTRRRRYTLTPARLRWDHFNLTYRILSFP
                     RNLLSPEETRRGLAAAFRMWSDVSPFSFREVAPERPSDLKIGFYPVNHTDCLVSALHH
                     CFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHAL
                     GLMHSQQDQALMHLNATLRGWKALSQDELWGLHRLYGCLDRIFVCTSWARKGFCDVRQ
                     RLMKRLCPRSCDFCYEFPFPTVATTTSPTRTKTRFVREGRNMTFHCGQKILHKKGKVY
                     WYKDQEPLEFSYPGYLALGEARLSIIANAVNEGTYTCVVRHRQRVLTTYSWRVRVRS"
     exon            168..304
                     /gene="Mmp23"
                     /inference="alignment:Splign:2.1.0"
     exon            305..444
                     /gene="Mmp23"
                     /inference="alignment:Splign:2.1.0"
     exon            445..612
                     /gene="Mmp23"
                     /inference="alignment:Splign:2.1.0"
     exon            613..777
                     /gene="Mmp23"
                     /inference="alignment:Splign:2.1.0"
     exon            778..888
                     /gene="Mmp23"
                     /inference="alignment:Splign:2.1.0"
     exon            889..1015
                     /gene="Mmp23"
                     /inference="alignment:Splign:2.1.0"
     exon            1016..1243
                     /gene="Mmp23"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actgcaaatc tgccatgggc tggcgggcct gtctccgtcc ggaggcgtcc ggcgctgtac
       61 agggccgctg gttgggggct gtcctgagcg ggttgtgtct tctctccgcg ctggcgttcc
      121 tggaatggct agggtcgccg acagagaccg cctggaatgc agctcaggga aatgtggatg
      181 cgccagatgt gggcggctcc actccccagg tacccagcct attgtccatg ctggtaaccc
      241 gaagacgccg ctacacgctg acaccggcca ggctgcgttg ggaccacttc aacctcacgt
      301 acaggattct ctcctttccc cggaaccttt taagcccgga agagactcgg cggggcctgg
      361 cggctgcctt tcgaatgtgg agtgatgttt ccccattcag cttccgtgag gtggcccctg
      421 aacgtcccag tgacctcaag ataggtttct acccagttaa ccacaccgac tgcttggtct
      481 ctgccctgca ccactgcttc gatggtccta caggtgaact ggcccacgct ttcttcccac
      541 cccacggtgg cattcatttt gatgacagcg agtactgggt cttgggtccc acgcgctaca
      601 gctggaagaa aggtgtttgg ctcacagacc tggtgcacgt ggcagcccat gagattggcc
      661 atgcactggg actgatgcac tcacagcaag accaggcact catgcacctc aatgccacat
      721 tgcgaggctg gaaggcactg tcccaggatg agctgtgggg actacaccga ctctatggct
      781 gcctggaccg gatttttgtg tgtacatcct gggcacgaaa gggattttgt gatgtccgcc
      841 agaggctcat gaagaggctc tgccccagaa gctgtgattt ctgttacgaa ttcccatttc
      901 ccacggttgc caccaccaca tcacccacca gaacgaaaac gaggttcgtg agagagggta
      961 ggaacatgac cttccactgt ggacagaaga tcctacacaa gaaaggcaaa gtatactggt
     1021 acaaggacca ggaacccctg gagttctcct accctggcta tctggccctg ggtgaggcac
     1081 ggctgagcat cattgccaat gcagtcaacg aaggcaccta cacatgtgtg gtacgccacc
     1141 gccagcgtgt tctcaccacc tactcctgga gggtccgagt gaggagctga gccagctcca
     1201 gcctctgtgc tggaagccag cagataaagc actttctctc tgaaaaaaaa aaaaaaaaaa
     1261 aaaaaaaaaa aaaaa
//
