LOCUS       XM_222162               7477 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MLX interacting protein (Mlxip),
            transcript variant X1, mRNA.
ACCESSION   XM_222162
VERSION     XM_222162.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 17, 2024 this sequence was replaced by
            NM_001427251.1.
            
            On Jan 21, 2021 this sequence version replaced XM_222162.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7477
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7477
                     /gene="Mlxip"
                     /note="MLX interacting protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 31
                     ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 190
                     samples with support for all annotated introns"
                     /db_xref="GeneID:304479"
                     /db_xref="RGD:1560774"
     CDS             224..2974
                     /gene="Mlxip"
                     /codon_start=1
                     /product="MLX-interacting protein isoform X1"
                     /protein_id="XP_222162.5"
                     /db_xref="GeneID:304479"
                     /db_xref="RGD:1560774"
                     /translation="MAADVFMCSPRRPRSRGRSVLLKPQVPEDDDDSDTDEPSPPPPS
                     GVATSARAHASAAPLPPRAGPGREEPPRRQQIIHSGHFMVSSPHREHPPKKGYDFDTV
                     NKQTCQTYSFGKTSSCHLSIDASLTKLFECMTLAYSGKLVSPKWKNFKGLKLQWRDKI
                     RLNNAIWRAWYMQYLEKRKNPVCHFVTPLDGSVDVDEHRRPEAITTEGKYWKSRIEIV
                     IREYHKWRTYFKKRLQQHKDEDLSSLAQDDDMLYWHKHGDGWKTPVPMEEDSLLDTDM
                     LMSEFSDTLFSTLSSHQPVAWPNPREIAHLGNADMIQPGLIPLQPNLDFMDTFEPFQE
                     LFSSSRSIFGSMLPPPTSVPAPDPSSPPSQGNILPNPALPPVSLPNSLIASSAAPSLD
                     PTEGQGCERTSQSVDPFIQPADFGPSEPPLSVPQPFLPVFTMTLLSPGPAPAPVPTAL
                     PLVSPPAPTLNPPTPPAFLQTQTFAGVSTSSPVITHTASATLTHDASATTFSQSQGLV
                     ITAHHPTPSPSPCGLALSPIPQPPAVGPPQPHLTFIHPKPVSLTGVRHKQPPKIVPAP
                     KPEAVSLVLKSACIAPAAFTGQPQKVIMTSAPLKREGILASTVSPSSVVIASAAITRA
                     SGVTEFLSHSTSSQPSPASRLFSPSAVQDALVKGEQAALHGGPQAPATGSSRDCPNSG
                     QASPCPSEQSPSPQSPQNNCSGKSTDPKNVAALKNRQKHISAEQKRRFNIRMGFNTLN
                     SLISNNSKQTSHAITLQKTMEYITKLQQERMQMQEEARRLREEIEELNTTIISCQQLL
                     PATGVPVNCRQFDHMKDMFDEYVKSRILQNWKFWIFSMIIKPLFESFKGMVSTSSLEE
                     FHRTALSWLDQHCSLPVLRPMVLSTLRQLSTTTSILTDPSQLPEQASEAVTRIGKRSG
                     ES"
ORIGIN      
        1 aaggaaagtt tgccctgcgc ctttaagagg tagaggcgag catccgattg gctaagacga
       61 gctgtgacat cacgaggagg ccggcgccct ccccctcagg ccgcgcgttc ccgggcagtc
      121 tgcgcgaggg ccgggccggg ccgccggccc ttcagtcttc tgtgcttctc tgctctctac
      181 gtcgtcccgg ctcccggggg atgccccgga ccaggttctc ctcatggctg ccgacgtttt
      241 catgtgttcg ccgcgtcggc cccgcagtcg gggtcgctcg gtgctgctca agcctcaggt
      301 gcccgaggac gacgacgact cggacacaga cgagccgtct ccgccgcccc cctccggcgt
      361 ggccacttca gcccgggccc acgcgagcgc cgcgccgctg ccgcctcgag ccgggccggg
      421 ccgcgaggaa cctccgcgcc gacagcagat cattcacagc ggccacttca tggtgtcctc
      481 tccgcaccgc gagcacccgc ccaagaaggg ctatgatttc gacacggtca acaagcagac
      541 gtgccagacc tatagcttcg gcaagaccag ctcctgccac ttgtccatcg atgcttcgct
      601 caccaagctc tttgagtgca tgaccctggc ctacagtggg aaattagtat ctccaaagtg
      661 gaaaaatttc aagggcctga agctccagtg gagggacaag atccggctca acaacgccat
      721 ctggagggcg tggtatatgc agtatttgga gaagcgcaag aatcccgtgt gccactttgt
      781 caccccacta gatggctctg ttgatgtaga tgaacaccgg cggccagagg ccatcaccac
      841 agagggcaaa tactggaaga gtcgcatcga gattgtgatc cgcgagtatc acaagtggag
      901 aacctacttc aagaaaaggc tacagcagca caaggatgag gacctttcta gcctggccca
      961 ggacgatgac atgctgtatt ggcataaaca cggggatggc tggaaaaccc cagtgcccat
     1021 ggaggaggac tcgctgctgg acacagacat gctcatgtca gaattcagcg acaccctctt
     1081 ctccacactt tcctcacacc aaccagtggc ctggcccaac ccacgagaaa tagcacatct
     1141 gggaaatgca gacatgatcc agcccggcct gatccctttg cagcccaacc tggatttcat
     1201 ggacaccttt gagcctttcc aggagctctt ctcctccagc cgatccattt ttggctccat
     1261 gttgcctcct cctacgtcag tacctgcccc cgatccgagc agcccacctt ctcaggggaa
     1321 catcttgcca aatccagctc tccctcctgt gagcctgccc aatagcctca ttgcctcttc
     1381 tgcagccccc tccctggatc ccacagaggg gcagggttgt gaacgcacat cccaatctgt
     1441 ggacccgttt attcagcctg cagactttgg tccctctgaa cctccattga gtgtcccaca
     1501 gcccttcctc cctgtcttta ctatgacctt actttcccct ggccctgccc cagcacctgt
     1561 tcccactgca ttgcccttag tttctccgcc tgcccctacc ctcaaccccc cgactccacc
     1621 agctttcctg cagacacaga cgtttgctgg agtcagcaca tcaagccctg tcattaccca
     1681 cacagcctct gcaaccctta cccatgatgc ttctgccacc accttcagcc agagccaggg
     1741 ccttgttatc acagcgcacc atccaacccc atccccatcc ccctgtggtc tggcactgtc
     1801 acctataccc cagccaccag ctgtgggacc tccccaacct catttaactt ttatacaccc
     1861 caaacctgtg tccttgactg gagtgagaca caagcagccc cccaaaatag tgcctgctcc
     1921 caaacctgag gctgtctcct tggtgttgaa gagtgcctgc attgctccag ctgcctttac
     1981 aggccaacca caaaaggtga tcatgacatc agctcctctg aagagagaag ggattctggc
     2041 atctactgtg tccccatcca gtgtggtcat tgcctctgct gccatcacca gggcttctgg
     2101 agtcacggag ttcctcagcc acagcacgag cagccagcct agccctgcct ctcggctctt
     2161 ctctccaagc gcagtgcaag atgccctggt gaagggcgag caggccgcac tgcacggggg
     2221 tccccaggcc cctgccacgg gctccagtcg agactgcccc aactcaggcc aagcctctcc
     2281 atgcccgtca gaacaaagtc ccagtcctca gtctccccag aacaactgct cagggaaatc
     2341 tacagacccc aaaaatgtgg ctgcattaaa gaaccggcag aagcacatct cagctgaaca
     2401 gaaaaggcgt ttcaatatca ggatgggctt taacactctg aatagtttga tctccaataa
     2461 ttccaagcag accagccatg ccatcacact gcagaagacc atggagtaca tcaccaagct
     2521 ccaacaggag cggatgcaga tgcaggagga ggcacggagg ctgcgggagg agattgagga
     2581 acttaacacc accatcatct cctgccaaca gctgctgcca gccacaggag tccctgtcaa
     2641 ctgccgccag tttgaccaca tgaaagacat gtttgatgag tatgtgaaga gcaggatcct
     2701 gcagaattgg aaattctgga ttttcagcat gatcatcaag ccgctgtttg agtccttcaa
     2761 ggggatggtg tccaccagca gcttggagga gttccaccgg acggctcttt cctggctgga
     2821 ccagcactgc tctttgcctg tcctcaggcc aatggtcctg agtaccctcc ggcagctgag
     2881 taccaccacc tccatcctga cagacccatc ccagcttcca gagcaagcat cagaggccgt
     2941 taccaggatt ggcaagagat cgggggagtc ctaagcttag ttggcatgtg actgcatgaa
     3001 atgcctggag atgcccctcc tacccttcct gacaccacct cagggctgcc cattgcactg
     3061 tcaggatgcc gtgctcaggt ctgaagcagg tttgaggcct gccaacagca gtatcccatc
     3121 ctgggaaccc atgctgtgac ctcctattct gtgacctcaa tcatcagtct cccctgcatt
     3181 tggggtggcc cagacaaagg gaaacatcgg ctgttccagt cctgtcctcc tggtgtcatg
     3241 tggtgtccag ggcccgcaag tgcaagacaa ggagacaagc ctgttgccgc atgtggggtc
     3301 atccaggtcc ttcagaattc ctttcctgtg acttccagac ttggcccgtg tcacatcctt
     3361 atctacttgt gctccactgg caagccctgc agtttttggc ctctgtagca gcagtgaagt
     3421 ctcttcattt cttgcaaccc cactggcacc taatcctctg ggctactgtt ccaacctctg
     3481 cagaatggaa tgtaccctcc ttagtggatt ccactgacgg ggaaatctcc acaacccctg
     3541 agccacgtgg aaaatggtga gtgtggaggc catctggaca ggatgaaggc agcagccatt
     3601 caaacctgct gtgctggctc agaaactccc taggcaatgt cttctctatg tcttagctcg
     3661 gtcgccatga cgtttcaaca ttgccagggc ctcggcctag agcctcttag gcctcccaga
     3721 tggggccctt ctgcgcctgt tctccaccca cttgtactct gcagttgtgg aagaggcaga
     3781 tacactcctg ggacggcctc ccttggtttc agccctccaa ggtcatactc catgttgctg
     3841 ctgtcatcct ggtcttttat ctgaagttta gctggagctc caaaccagga cagttctcag
     3901 accaaagatg tcatcttact aaagtctgtt tcatcttgta tgaagaggaa gaaacaaact
     3961 gctcttaggc aagatgtcaa ggagtcagcc cttgaaacta tctccaggct agctggtaag
     4021 gtgctgtgct cagatttgaa ccagtggcgt ttggagggtg gcacgtgtct gaaggttcaa
     4081 gtgtcccgat gtgtgttaca gatggtggag acagaagggt taggggaagg gagcacttga
     4141 ccctcatcct tctctgctgc ccctgagagg ctgcaggcgg tatggtgtgg tatggtgtag
     4201 tactctgcag cactcggccc agtaaagggc tcctcctgga agaatgtgct tttctgtcct
     4261 gccgtgacac ctagagcagg cagcaggctt tttcttggac tctgtcctcc tggccttgcc
     4321 tcaccatgct acctgtcctg agaagaccac acgaagaggg gagcccagga tgacccctga
     4381 atttctgatc catttggaag ctcctgctga tgcctaaacc tgctctggac taggtagtta
     4441 gaggacaaag aaagggcagg ggctgctggc catgtcaaca tttatgctga gcccctaacc
     4501 aatcgcttgc ttcattgtct aatttctgtc ctgtatggga atggtttggt ggccctcgtc
     4561 ccatgcccca gaacgtgttt acaggtgggg ggaagaacac aaggcatgta ggctggacct
     4621 tggcatctcc accaagcacc ccttccgttc ccaaggacaa agtgaaattg ttctccagaa
     4681 ggtgaaggcc gctgtggtaa gaaggaagaa ctaaaccact gctgtgaggg tcgcaagaag
     4741 tcctcctcct cctcctcctc ttcttcctcc tctccctctt cctcctcctc ctcatcctct
     4801 tcctcctctt ctttctcctc ccccccccat gccacacgac acaggccaca gcatggctgt
     4861 gcaggacttt ggttctctcc tccccttgta ggggagtaac gtttttaaag ctctatgggg
     4921 tataagattg gccttttgct tctctggcct acctctccct tttgctgagt taatttcatc
     4981 ttgtttcctc agatgtttaa ggctgttgtt agtttgtgtg aaactggggc tagggagggg
     5041 agggggcagg gggtagaggg agagagagag agagagaatg tgtgtgtgtg tgtgtgtgtg
     5101 tgtgtgtgtg tgtgtgtgtg tgtgtgttgg cagactttgt taagtgcatg cttattttgt
     5161 ttttgagagt gactccattt cctttctctt ggtgctcacc tttgccgtgg ctgtgaggcc
     5221 acaatgcttt aaaactctcc tccaggaatg attatttcta ccttggagct tttcttgttt
     5281 tgaaatcttg cctgatgaac ctgcccaatc agagggtcct ggccttgacc tctgttggac
     5341 accaaggccg gcatttggaa atagccaagg ccaccctgcc tagagtctcc actgggcgct
     5401 gaccacattg ttcagctggg gtttgtttac agttattttc attcccattc ctgtccccac
     5461 tcacacagaa gaaacttcaa aatgttggca ctttggagaa taagaatatc ggccacaaag
     5521 gagaaaccac agagccacct gggaaatctc tgcagtgttt ctgtgaaatc tgaacaagct
     5581 atcagcacat ctgctgcctg ttctttcact atgagtgggc actgcagagg caggcagggt
     5641 agctttggct aaaatgcttc ctcaaagtta atggagggct atgcaccagc cgtcaccccc
     5701 gaagaggagg ctaggagtgc gccagtagtt ctgcacagca caagggaagc atggcagctt
     5761 cgggacttga tggtgacaca ttgggtcttc ttgtagaaga ggctggaagt ggtcagccag
     5821 cacgaattct cacgtggccc gatcatgaac cctggatctt gtctgtgtgt tgtcatctat
     5881 accccctccc ccagacatgc atagagatct gtcctctaag gttctatgcc ctgactaaga
     5941 atgatgtcca cttagattct taggggacat ggcacccatt ttctggtaga gttaagtggc
     6001 aggtgacacc aggcctgcca atggccagca gcctcccggc tgttggatcc tgtggctgct
     6061 ggatcacctg gcctcagctt aactcctttt acctgctggc tcttgtcttc cttctacaat
     6121 gtcagaaatc cctttctgtt catcctatcc tggtctctgt ctcgattagg gcctcctaag
     6181 agaagctgag tatatgtggg cctctcactt ttctttcctg ggagctagac atgccctctt
     6241 tctagataaa tagatacagg gcacagttga agcccaccat tgtgtgtgga acttggtttt
     6301 ttcagtgtca ccttgtggtc ttgttgacaa ggtgtgtgga cagtgataca gaagcagtcc
     6361 cctagaatgc ccgtatttca gagaagtaca attgggctta gcccctgggt gtctcgtagt
     6421 gtctcagagg agctgacctg ggtctgtgct ggtgcaacag gaagcggcag tcacgtcgct
     6481 gtggaagagt atgaaggcac agagcatgtg tgaaatatgt ccctttagca cacacctcgg
     6541 ctaggatctc ctcaataggt tttgtgatct taaggacagc tgatgggaga caccaagagt
     6601 gtgggagaaa gaagccttgg gaaacagccc tgacccggtg ctgcttctat gggcaagaat
     6661 aggtcaagct acctgctctt tctgaggaat gggcctctct cttcactaga tagggctgtc
     6721 tgcttgtcag agcttgtaag actcaacctt ctggaaagaa aagggaactt tccacagtga
     6781 atgttaacgt gtgtgtgcat gcgcacttgc tcaagcctgt gtgtgtgcat gcgcgtgttt
     6841 acttggtgga attttatttt tgtaaaattc ctttccggtt atttagtaga attcacctac
     6901 acctccctgc ctaacgttgg ttccaccatt ataaccctag gcatagtgaa tttggaactc
     6961 ctttgaggtt cctgaacagg atctagcatt cttgaaagcc gagattgtgg aagggtggga
     7021 gacactgatt atgtatctgt ttcctagttt acatcctgca ggttaaaagg tctcatggcc
     7081 tcagctaggc tctgtccctc atgggggagt ccagtaccac tcccctaggc accttgtcac
     7141 ctgaatcttc accccgtgaa gggaaagcag gcttattagc ttgctctgta gcacccagca
     7201 tgttctcctt caagctcttc aagtttcggc ttctgtgcac aggctaagtg tgtgttgtgt
     7261 gttttggtga tggtacaggg ctccttgagg aggcagctac acctggggta gggtgggttt
     7321 catttatacc agagatccct ggggctgctc acctgagcct ggtcctcttg aagcctgcta
     7381 ttgacaagca cgtttccacc agctgtaccc aacactacaa tgcattttta aaactatatt
     7441 tgcatctaag acaataaaat cttatttttt ttggaaa
//
