LOCUS       NM_001399384            2128 bp    mRNA    linear   ROD 12-JUN-2023
DEFINITION  Rattus norvegicus mirror-image polydactyly 1 (Mipol1), mRNA.
ACCESSION   NM_001399384 XM_003750162
VERSION     NM_001399384.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Cheung AK, Lung HL, Ko JM, Cheng Y, Stanbridge EJ, Zabarovsky ER,
            Nicholls JM, Chua D, Tsao SW, Guan XY and Lung ML.
  TITLE     Chromosome 14 transfer and functional studies identify a candidate
            tumor suppressor gene, mirror image polydactyly 1, in
            nasopharyngeal carcinoma
  JOURNAL   Proc Natl Acad Sci U S A 106 (34), 14478-14483 (2009)
   PUBMED   19667180
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000164.1.
            
            [WARNING] On Jun 27, 2023 this sequence was replaced by
            NM_001399384.2.
            
            On Jan 7, 2022 this sequence version replaced XM_003750162.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR8487231.58610.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132291, SAMD00132292
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-195               JACYVU010000164.1  51043456-51043650
            196-399             JACYVU010000164.1  51131697-51131900
            400-523             JACYVU010000164.1  51134176-51134299
            524-629             JACYVU010000164.1  51135508-51135613
            630-759             JACYVU010000164.1  51156083-51156212
            760-793             JACYVU010000164.1  51168145-51168178
            794-964             JACYVU010000164.1  51168438-51168608
            965-1072            JACYVU010000164.1  51226373-51226480
            1073-1167           JACYVU010000164.1  51285206-51285300
            1168-1398           JACYVU010000164.1  51329942-51330172
            1399-2128           JACYVU010000164.1  51374308-51375037
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q23"
     gene            1..2128
                     /gene="Mipol1"
                     /note="mirror-image polydactyly 1"
                     /db_xref="GeneID:100911970"
                     /db_xref="RGD:6504372"
     exon            1..195
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            196..399
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     CDS             266..1465
                     /gene="Mipol1"
                     /codon_start=1
                     /product="mirror-image polydactyly gene 1 protein"
                     /protein_id="NP_001386313.1"
                     /db_xref="GeneID:100911970"
                     /db_xref="RGD:6504372"
                     /translation="MSSEQNMHELGNEVTSQDLVLPGRKSSNCQVLRPCPDEVLSATC
                     SVECGKNYESVIYHQVISDLNKETSVAYLQKELEILRANNKKLQEKLAKEDKEKRKLK
                     LQLDLHEKAAEAAIAERTAALVEEVYFAQRERDEAIMCRLQLALEERDEAIARMKHME
                     MSLKMLENINPEENDMTLQELLNRINNADTGIAIQKDGAVIVDRIYKTKECKKRITAE
                     EMSAVIEERDAALSQCKRLHQELHRLKEQNQTSANNTRHPTAENNQERALKAKLLSMQ
                     QARETAIEQYKRLEEEIQTLRVYYSLHKSLSQEETLKDQFNHALSIYEDALKNRESVV
                     SITQQQNEELATQLQQALTEHADMELQLQCAVEVSRAASEKVQKLERLVDVLRKKVGT
                     GTVRTVI"
     exon            400..523
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            524..629
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            630..759
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            760..793
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            794..964
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            965..1072
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            1073..1167
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1398
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
     exon            1399..2128
                     /gene="Mipol1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgctcggtg cgtgcagtct cgtccgcgcg ggttctcgcg tgcgtgcagc acgtttcctc
       61 tcgcccaccc cgcccttttt ggtcactcag aggcgcgcag cgggcgcacg gcgattggct
      121 ccctcggtgg cggcgccaca ggacccgcga actgcgtgag cggagtgggc ccttaaggat
      181 cccgtggctc cacagatatg acctttgtct tgtacaactg acctctgtgg gaagtgcgga
      241 cgcaccagca gatgagcagc tgactatgag ttcagagcag aacatgcacg agttaggcaa
      301 tgaagtcaca tctcaggacc ttgtattacc aggaagaaaa tccagcaatt gtcaggtcct
      361 ccgtccttgt ccagatgaag ttctatctgc aacgtgcagt gtggaatgtg gaaagaatta
      421 tgaatctgtg atttatcatc aagttatctc tgacttaaat aaagagacat cagtagcata
      481 tcttcaaaaa gaattggaaa ttctcagagc aaacaataaa aagcttcaag aaaaattggc
      541 taaagaagat aaagaaaaga gaaaattaaa gcttcagttg gacctccacg aaaaagcagc
      601 agaggctgcc attgcggaaa ggactgcagc tttggttgaa gaagtgtatt ttgcacagcg
      661 agaacgtgat gaagctatta tgtgcagact acagttagcc cttgaggaga gagatgaagc
      721 cattgcacgt atgaagcata tggaaatgtc actaaaaatg ctagaaaata ttaaccctga
      781 agaaaatgac atgacattac aggaattact gaacagaata aacaatgcag acactgggat
      841 agctattcag aaggatggag ctgtaattgt ggataggatc tacaagacca aggaatgtaa
      901 aaagagaata actgcagaag aaatgagtgc agtcatagaa gagcgggatg cggctttatc
      961 tcagtgcaaa cggctgcacc aggagcttca tcgtctgaaa gagcagaacc agacttcagc
     1021 aaacaacacg agacatccga ctgctgaaaa caatcaggaa cgtgctctga aggcaaaatt
     1081 attatcaatg cagcaagcca gagaaactgc aattgaacag tacaaaaggc tggaagaaga
     1141 aatccagaca ttacgagttt actacagttt gcacaaatca ttatctcaag aagaaacctt
     1201 gaaggatcag tttaaccacg cccttagtat ctatgaagat gccttaaaaa accgagagag
     1261 cgtggtctcc atcactcagc agcagaatga agaactggcc acccaacttc agcaggctct
     1321 cactgagcac gcagacatgg agctacagct tcagtgtgcc gtggaggtct cccgagcagc
     1381 cagtgaaaag gttcagaagt tagaaaggtt ggtggatgtc ctgaggaaga aggttggaac
     1441 aggaactgtg aggaccgtga tctgactgaa agccacccag tctgggggag caatcacatc
     1501 tggtgaccag gctgcctcat tcagcactgt gtaaacacta aaagccttaa cttagcaaac
     1561 agttgttaga agtgggacac tccaaccaca ttccaagctg agataaaatc aaatcacaaa
     1621 tgtttaacca ctttgctgct gacttcagtt atttatccaa atatattaac tacaggcttt
     1681 taccagctat aacactgcag cttattttgt agctgtttta tatttgtgcc ttcaatgtaa
     1741 atcttttagc cagtgtacta taaaaagacg tgtgaagtcc gtcaggatcg gagccccgca
     1801 tatggccctt tctgaatcaa agtgcagcaa agtaaatatt gtccaagcct taatccactg
     1861 tgttaggtca aaacttcaaa taaatgcgtt ttcagtatag agtatatttc ttagctgatg
     1921 ggagacgctc agacatgaga gaatgtaggc taccttcaat gtatgtatga agctattgtt
     1981 cttgatattg aagaatatgg tatagatgcc ttgaattaaa tgtataattt actttaatcg
     2041 tacaataaat ggcagtcacc aagacatgat ttttgtttca ctataaataa tatacactgt
     2101 tttcaataaa aagggctatt aaagtaca
//
