LOCUS       XM_039104747            1461 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitoguardin 2 (Miga2), transcript
            variant X5, mRNA.
ACCESSION   XM_039104747
VERSION     XM_039104747.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1461
                     /gene="Miga2"
                     /gene_synonym="Fam73b; RGD1310887"
                     /note="mitoguardin 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, 1 long SRA read,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 34 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:296623"
                     /db_xref="RGD:1310887"
     CDS             274..1446
                     /gene="Miga2"
                     /gene_synonym="Fam73b; RGD1310887"
                     /codon_start=1
                     /product="mitoguardin 2 isoform X3"
                     /protein_id="XP_038960675.1"
                     /db_xref="GeneID:296623"
                     /db_xref="RGD:1310887"
                     /translation="MAFRRTEGMSMIQALAMTVAEIPVFLYTTFGQSAFSQLRLTPGL
                     RKVLFATALGTVALALAAHQLKRRRRKKKQVGPEMGSEQLGTFPMPILMARKVPSVKK
                     GCSSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSLASMVMVNSSSPTAACSGSWETR
                     GMEESVPTMDGSAESLYVQGMELFEEALQKWEQALSVGQRGDGGSTPTPGDSLQNPDT
                     SSEALSEPESQRREFAEKLESLLHRAYHLQEEFGSTLPSDNMLLDLERTLMLPLTEGS
                     LCLRADDEDSLTSEDSFFSATELFESLQIGEYPLPLSRPAAAYEEALQLVKEGKVPCR
                     TLRTELLGCYSDQDFLAKLHCVRQAFEGLLEERNNQVFFGEVGRQMVTGLMTKAEK"
ORIGIN      
        1 cgatgggatc ccgggtgagt gacggccact gcgcgggcga gcagcgcagc agggctagga
       61 gcgaggcttg cagagcatgg aacccggccc tcgtaggggt ccgcaaccca gccggtccgt
      121 gaaagtgtcc aagctttgtg gaatgacctg ttatgtgtgc ccctgtcctg ctggggagtg
      181 gatggtgccc aggacccagc cagagaccag ctgaagacgt tctcctcgga agctctcacc
      241 ccaggaggtc ccgtcccggg tgctgggcct accatggcat tccgtaggac tgagggtatg
      301 tccatgatcc aggctctggc catgactgtg gctgagatac cagtgttcct gtacacgact
      361 tttggtcagt ctgcgttctc ccaactgcgg ttgaccccag gcctgagaaa ggttcttttt
      421 gccacggccc tcgggactgt ggccttggcc ctggctgccc accagctgaa aaggcgccgt
      481 cggaagaaga aacaggtggg ccccgagatg ggaagtgagc agctgggcac cttccccatg
      541 cccatcctca tggcccgcaa ggtcccttcg gtgaagaaag gctgctccag ccggagggtt
      601 cagagcccca gcagcaagag caacgacact ctgagtggta tctcctccat agagcccagc
      661 aagcactcag gctcctccca cagcctggcc tcgatggtaa tggtcaattc atccagccct
      721 acagctgcgt gctcaggctc atgggaaacc agagggatgg aggagtctgt gcccaccatg
      781 gatggcagtg ctgagagcct ctatgtgcaa ggcatggagc tgtttgagga agccctgcag
      841 aaatgggagc aggcactgag tgtgggtcag agaggggacg gaggcagcac ccccacacca
      901 ggtgacagcc tccagaaccc agacacctca tctgaagcac tgtcagagcc agagtcacaa
      961 cgaagggagt ttgctgagaa gctggagtcc ctgttgcacc gggcctacca tttgcaggaa
     1021 gagttcggat ccaccctccc ctctgacaac atgctgctgg accttgagag gaccctaatg
     1081 ctgcccctga ctgagggctc attgtgtctg cgagctgatg atgaggacag cctgacctca
     1141 gaagactcct ttttctcagc cactgagctc tttgagtccc tgcagatcgg agagtacccg
     1201 cttcctctct ccaggcccgc tgctgcctac gaggaggctc tgcagctggt gaaggagggg
     1261 aaagtacctt gtcgaacact caggacagag ctgctaggct gctacagtga ccaagatttc
     1321 ctggccaagc tgcattgtgt acggcaggcc tttgaggggc ttctagaaga aaggaacaac
     1381 caggtgttct tcggggaggt cggccggcag atggtgacag gcctaatgac caaggctgag
     1441 aagtgattga tggccatgat g
//
