LOCUS       XM_039094721            5523 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitochondrial calcium uptake family,
            member 3 (Micu3), transcript variant X3, mRNA.
ACCESSION   XM_039094721
VERSION     XM_039094721.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094721.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5523
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5523
                     /gene="Micu3"
                     /gene_synonym="Efha2"
                     /note="mitochondrial calcium uptake family, member 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 mRNAs, 36 ESTs, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 45 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:364601"
                     /db_xref="RGD:1563411"
     CDS             295..1755
                     /gene="Micu3"
                     /gene_synonym="Efha2"
                     /codon_start=1
                     /product="calcium uptake protein 3, mitochondrial isoform
                     X3"
                     /protein_id="XP_038950649.1"
                     /db_xref="GeneID:364601"
                     /db_xref="RGD:1563411"
                     /translation="MAALRRLLWPPPRLSPTLAPQQPFLSPWGRPAGTAPGMSGRPFS
                     GREEDEGAVAEAAWRRRRWGELSIAAAAGGGLVGLVCYQLYGDPRADPSELVAPELDE
                     SPRGRGLLPIPVAAAKETVATGRAVTEDLDLYATSRERRFRLFASIECEGQLFMTPYD
                     FILAVTTDEPKFAKTWKSLSKQELSQMLSETPPVWKGSSKLFRNLKERGVISYTEYLF
                     LLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVVLKPDAEELVSRSYWDTLRRSTSQ
                     ALFSDLAERADDITSLVADTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLS
                     YSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPEEKGITFDEFRSFFQFLNNL
                     EDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVFKIFDVDKDDQLSYKE
                     FIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR"
ORIGIN      
        1 gccagcggtt cacgggtgtt gggctccctt gctagttgcc gtggctacgg gcactgtcct
       61 ctactactgc gtggcggggc tggggaagca cgatggagaa cagcctggac ttgggcggcc
      121 ctcgagctct ctccaacgtg cgcctgtatc caaaggctgc tctcgggtaa gccgggtccc
      181 ggctacggtc gacagctcgt ccgctccaag cgctagcgct gctccgactt ctcgcgagat
      241 ttcagaccgc ctctcccgcc cccactcccc acggctgggc ccgcagctcc cgctatggct
      301 gcgctgcgga ggcttctgtg gccgccgcct cggctttcgc cgacgctcgc ccctcagcag
      361 ccattcctct cgccatgggg gcggcctgcg gggacggctc cggggatgtc gggtcggccc
      421 ttctccggcc gggaagagga cgagggggcc gtagcggagg cggcgtggcg gcggcggcgc
      481 tggggtgagc tgagcatcgc ggcggcagcg ggcggggggc tggtcggcct tgtgtgctac
      541 cagctgtatg gggaccccag agccgacccc tcggagctag tggccccaga gctggacgaa
      601 tcgccccgcg gcagggggct gctgcccatc ccggtggctg ctgccaagga gacggttgct
      661 actggcagag ccgttactga agacttggac ctctatgcta catctcgaga gagacggttt
      721 cgtttatttg catctataga atgtgaagga cagttattca tgactccata tgattttatt
      781 ctggctgtta caacagatga gcccaaattt gctaaaacgt ggaagtcact ttctaaacag
      841 gaattaagtc agatgctttc agaaactcca ccagtttgga agggatcatc aaagcttttt
      901 cgaaatctta aagaaagagg tgtgatttct tacacggaat atctttttct tttatgtatt
      961 ttaacaaagc cccatgcagg ttttagaata gctttcaaca tgtttgacac tgacggaaac
     1021 gagatggtgg ataaaaaaga atttttggtg gtacttaaac cagatgctga ggaacttgtc
     1081 tccagaagct actgggatac cctgagacgt agcacaagcc aggcgctctt ctcagacctt
     1141 gcagagcgtg ctgatgacat cacaagctta gtagcagata ctacacttct tgtacacttt
     1201 tttggaaaga aaggaaaagc tgagctcaac tttgaagatt tttatagatt tatggataat
     1261 ctacaaacag aagttctaga aatagaattt ctttcctact ctaatggaat gaatactatc
     1321 agtgaagaag attttgccca tattcttcta cggtatacta atgtggaaaa tacatcagtg
     1381 tttttggaaa atgtgcgcta cagtatacct gaagaaaagg gtatcacatt tgatgaattc
     1441 aggtcatttt tccagtttct aaacaactta gaagactttg caatagctct caatatgtat
     1501 aactttgcaa gccgttctat aggacaagat gaatttaaac gtgctgtata cgtagctacg
     1561 ggactgaaac tttcaccaca tttggtgaac actgtcttca agattttcga tgttgacaaa
     1621 gatgaccaat taagttataa agaatttatt gggattatga aagacagact ccacagaggg
     1681 ttccggggtt ataaaacagt ccagaagtat ccgactttca aatcctgcct gaaaaaggaa
     1741 cttcatagca gataaatcct cctaaacaag aattggaaga atataatcta tgtgactagg
     1801 caaggagcaa gattttgagt ggatccaata taaagtcaga gcatgcagaa aataaaagga
     1861 atgtggaatg ctctgaaatg tacatctttt tccttgaacg gagtttatca acatcagagg
     1921 aaaacttcgt cttgtaacta caagcattaa cggggactga gcccgagcac caccagagaa
     1981 acctgctgca aacactgagt gtaatcactg agctttcgcc ttgactgact gctctgaact
     2041 cttcattccc taacatgggt agtcccgatg accatctgag aatatttaga ttgtttattt
     2101 attagaaacg tcctttattt cagaataatt tatgaatgat gactatagat ggaaacacat
     2161 ttcttcagtt tgcactgtga gcgtgtgttc atacagtgag tattgcttca ggcttgtctt
     2221 gggcccttca ttgttgtaag tatttgttat ttatcttgta tttaattata ctgaagtaat
     2281 ttcagaaaac aagtgagaat ttactaagca ataggatgat ggtttacatt gtactttcag
     2341 cttttaaaag tacttatgta atatacattg ttggatttat gtaaattttt gtttttgccg
     2401 ttctttgtgt gtcttgtctt gttttgtttt tgtaccaaag ccaacaggaa ttcaggtatt
     2461 ttattttaaa agaaatttag attttctttc taagaaaaca cagcagccgt gtgctggtgt
     2521 tagaagcaag aagagtggta gtagtaatca ccatcgtgag gttcctagtc acaggagtga
     2581 catggaaaca agatcagtaa catagtggat attattaata tatgttagta gcatcaaaac
     2641 taatatagtt ggcctagaag gttgatgtat atttatttga tagaagataa tgttttgttt
     2701 cttgaaaaaa ggaccacatg caaaattgat ccaaacagtc agtagtgatt aatcatttat
     2761 aactaatcca ttacatcgaa ataatatgtc ttaaaagaga aaataaaact ttctcttgaa
     2821 aaaccccact tgagagactg gccagcatgg gtcacaactc aaagtctgcc tgggctgtag
     2881 tgtacgctca agccaccctg gccacttaga agaagaaaaa gtgtagctta gtggtggagg
     2941 gtttgcctgc catgtgtgag gcctcaggtt taattcccaa ctctgaaaaa gaaggggaag
     3001 gggaagaaag aaaaagagat cctagatttt cacattgaaa aataatttta gaatatttaa
     3061 tagaactttg gctacatgat aaaactgatt tatacaaggg tactataaat aacgcaatga
     3121 gttttaagct aatatattta tgtattgcat gtcaaaagat taatagattg atttatcttc
     3181 ttttataaga tgtacatagt ataaattgca tacactccaa ccattacttt gcttttgcat
     3241 cggaaaatag gaaacactgg ctttatttta agttattgaa tgtgaaattg gtctgcatca
     3301 gcctatttgt aaaatgttat ttttgtgtta ttagtattga ttatgttttt agacccttcc
     3361 acattctttg tctgatatta tttattgcac caataaagaa atataaatat gcaaatgcag
     3421 tagagttata cttacataat ttcacctgct acatacacat ttatcatgtc ttaggcctag
     3481 attgttctta gtaatacatg gtgtataaaa tcattgaaaa aatacaaatt aatctttgtc
     3541 tattaggtat tttattacac ataatggaaa ccttgttgat acggattaaa agttaaataa
     3601 cctattcaaa gatcctttgt aagtatgtca atgtcccaag aaaataacat aatatattca
     3661 cagccactgt cccttattgc tttattgtga agctgtttat atataaggtg gcaaaataat
     3721 ataaaaatga gggaaataaa atactctgac caattaataa ggtaagagaa tggtgagtga
     3781 cagtggcttc cctctcagca ctcttaaact tttctgccta tatagtagag gtagggtatg
     3841 gttaagtcag ttgaagtatt tttgaatgtt ttcaaataat gcactaaatt cacaaatgtt
     3901 agcttcgaat tttccttcta caaattacac aaatttcacc aacattaacc tctgcatata
     3961 attttagtgt tatgcttctt gaagaaagcc tacatggtaa acggtatttg gtacttctca
     4021 gaatagttta taataaatta ttttagccta aaatctgatt gttactacaa aacttaattg
     4081 tgaagctaca tcttaattgt tatattatct taaaataaat ttacattttg aatcaaggaa
     4141 ttgcagtttg ctattgagta tatcagtgaa ctaattttgt tctgaaaata tcactttcta
     4201 aggtgggaaa tcttagtggg ttaccattga tcctaaaccc acttttgtag tatacgtgcc
     4261 atcaaactca cgaaaatctc agtgggtaca tacattgcag tcttggagcc ttctcagagc
     4321 attgcagagg tccttgtctt atagaactgt gttagtacta caaagatttt caggaagttt
     4381 acatgtgact taagagtcgt cttgttaaga gaacacctaa aaattatatt ttaaaggtgt
     4441 attagttatt ctctcctgtt ttgttttgtc ttggtcttag tttcattaga cagtctgact
     4501 ttgtggccac agatgattca aattccgtgg ttcaagcagt gctctggcct aggtcacctg
     4561 agttctcaga atgtcggtgt atatcgccac acctcatccc acctctgcta tcagtaaaca
     4621 aacactaaag ggtgtgaaaa tgtgaatctt gtaatagtaa gtaaaataaa atcttaagtg
     4681 ttcaaaaagc atgtttttct tttggggcag catttttact ttgttagtta ctcctgaaaa
     4741 gatggcttgg cagtatcaca ttagagtctg tgaaacataa cctgtgatta attgtcttta
     4801 tatcatagta aatattttag catcttaaaa ataagagcat gcctataatt aaaactatat
     4861 gtgtgtaagt atgcaatgct tttagaacat aaaaagttac tgtgaaattc atctttcaag
     4921 gataattttg tccacttagt gaaggacaag aagttcttaa caagaagttg gtagggaaaa
     4981 aaaagaaaaa agaaaaaaca gcaacaaccc cccccaaaaa aaagcaaaca aacaaacaaa
     5041 aaaaaaacaa gcacatggaa taggaatcta aatgaggaga gttttttttt tattaattga
     5101 gattaagtaa taggaaaaaa ttattttaaa tgcatgcaca taaaggtaaa atggtattgt
     5161 gtgttttcat atgagttcca ggtggcaaag atggttttaa tgagtgtggt gtggtttgct
     5221 gtccctccct cgccagtgct ggtgacgctg tcttgactga cactgaattg ttactgtgcc
     5281 tttatctctg gatcacagca tcctgatgtg tacttaaact ccataatttt aacatgtatg
     5341 tccacaagct tggcacagca gtacgtaata gaagagaata ggaagttcgt ttatagagtt
     5401 gatatgacat tacctgtaag atatctatct gagagcatcg tagtttacaa tgcctactca
     5461 gctatagttg tattcaaaat atattttatt atataatact gcattaaaat tgtattcatt
     5521 gta
//
