LOCUS       XM_017594456            3071 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MIA SH3 domain ER export factor 2
            (Mia2), transcript variant X15, mRNA.
ACCESSION   XM_017594456
VERSION     XM_017594456.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017594456.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017594456.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3071
                     /gene="Mia2"
                     /gene_synonym="Ctage5; Mgea6"
                     /note="MIA SH3 domain ER export factor 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 64 ESTs, 1 long SRA read, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 39 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100912115"
                     /db_xref="RGD:6488546"
     CDS             321..2699
                     /gene="Mia2"
                     /gene_synonym="Ctage5; Mgea6"
                     /codon_start=1
                     /product="melanoma inhibitory activity protein 2 isoform
                     X15"
                     /protein_id="XP_017449945.1"
                     /db_xref="GeneID:100912115"
                     /db_xref="RGD:6488546"
                     /translation="MAEAGVSVTEESPGVVAALPEDMRADFNPNGFSLELAICVLTVG
                     LLAIVLFLWRGFRSIRSRFYVGREKKLALELSALIEEKCKLLEKVSFVQKEYEGLESS
                     LKEASFEKESTEAQSLEAAYENLERSKSKLEDEILLLEKKLEEERVKHSEQDELMADI
                     SKRIQSLEDESKSLKSQVAEAKTTFRIFEINEERLRGAIKDALNENSQLQESQKQLLQ
                     EAEIMKEQVSDLDKQKVTLEESRAQAEQVLSEKETQIESLIKSLLKMKDWAAVLGDDT
                     ADDGNLDLDMKSGLEDTASLDNQPKGALKKLIYAAKLNASLKALEGERNQIYTQLSEV
                     DQIKEDLTEHIKSLESKQASLQSENTEFESESQRLQQKLKVITELYQENEMKLHRKLT
                     VEENYRLEKEEKLSKVDERISHAAEELETYRQRAKDLEEELERTIHSYQGQVISHEKK
                     AHDNWLAARTLERNLNDLRKENAHNRQKLTETEFKFELLEKDPYALDVPNTAFGREHS
                     PYGPSPLGRPPSETRAFLSPPTLLEGPLRLSPLLPGGGGRGSRGPENLLDHQMNTERG
                     DSSYDRLSDAPRAPSDRSLSPPWEQERRMTAHPPPGQPYSDPVPQRQDRFYSNSGRLS
                     GPAELRSYNMPSLDKVDGPVSSEMESSRNDTKDNLGNSNVPDSPHPTESEAAGRGFIP
                     PPFPPVRAPLFPVDPRSQFMRRGPSFPPPPPGNIYTAPRDYFPPRDFPGPPLPPFPGR
                     TVYAPRGFPPFLPPRAGFFPPPPHHENRSELPPDMSPPSKEPAADPPETQET"
ORIGIN      
        1 ctacatttag ttcttttctg agaactcctc gtgtccggca ggagtccaca cgggcttgat
       61 ctggtggcac tcccgggagt acctagggct aatgcagtct taagactggg gcgcctagcc
      121 agcgcccatc aggaggacac ggtgagcgag cgaacccgca cgctggcccg aggaccgacg
      181 tgtgcttgcc caggagaggt taaactctga tcagaccaca cagttgaccc gaacgccttc
      241 gtgtccagag tccgaagtgc ggactcacaa agcaggtcgc accggctcac gcgtcacggg
      301 ccgtttttct agcctgaatt atggcggagg ccggcgtctc tgtgacggag gagtctccag
      361 gggttgtggc agcattgcct gaagatatga gagcagactt caatcccaat ggtttttcat
      421 tggaattggc gatatgtgtg cttaccgttg gactgcttgc aattgtcctg tttctgtgga
      481 gaggcttccg atcaattcga agccgatttt atgtggggag agaaaaaaaa cttgctcttg
      541 agctttctgc actaattgaa gaaaaatgca aactacttga aaaagtcagc tttgttcaaa
      601 aggagtatga aggcttagag tcatctttaa aggaggccag ctttgagaag gagtcaacag
      661 aagcacaaag tttggaggca gcctatgaaa atctagaaag atccaaatct aaacttgaag
      721 atgaaatact actcctagag aaaaagctag aagaagagag agttaaacat tctgaacagg
      781 atgagttgat ggctgatatt tcaaaaagga tacagtccct agaagatgaa tcaaagtctc
      841 tcaaatcaca agtagctgaa gccaaaacga cctttagaat atttgaaatc aatgaagagc
      901 gactcagggg agcaataaaa gatgccttga atgaaaattc tcaacttcag gaaagccaga
      961 aacagctttt acaggaagct gaaataatga aagaacaagt gagtgatctc gataagcaga
     1021 aagtgacatt ggaagagtcc agagcacagg cagagcaagt tctgagtgag aaggaaactc
     1081 agattgagtc tctgatcaaa agcctgctaa agatgaagga ttgggctgct gtgcttggag
     1141 acgacacagc agatgatgga aatctggacc tggatatgaa gagtggccta gaagacactg
     1201 cttccttaga taatcagcca aagggagctt tgaagaagct gatttatgca gccaagttaa
     1261 atgcttcttt aaaagctctg gaaggagaaa gaaatcaaat ttatactcag ttatctgaag
     1321 tggatcaaat aaaagaagac cttacagagc atatcaaaag tcttgagtct aaacaagcat
     1381 ccttgcagtc agaaaacaca gagtttgaaa gtgagagcca gagacttcag cagaaactga
     1441 aagtcataac tgagctgtac caagaaaatg agatgaagct tcacaggaaa ttaacagtag
     1501 aggaaaatta ccgattagag aaagaagaaa aactttccaa agtagatgag agaatcagcc
     1561 atgcggccga ggaactggag acctacaggc agcgtgccaa ggaccttgaa gaagaactgg
     1621 agagaacaat tcattcttac caggggcagg ttatttctca tgaaaaaaaa gcacatgata
     1681 attggctggc agctcggact cttgaaagaa atctcaatga tttaagaaaa gagaatgccc
     1741 acaacagaca aaaattaact gaaacagagt ttaaatttga acttttagaa aaagatcctt
     1801 atgcacttga tgttccaaat acagcatttg gcagagagca ctccccatat ggtccctcac
     1861 cattgggccg acctccatct gaaacgagag cttttctctc tcctccaacg ttgttggagg
     1921 gtccactcag actctcccct ttgcttccag ggggaggagg aagaggctca cgaggccctg
     1981 agaaccttct ggaccatcag atgaacactg aaagaggaga ctcaagctat gacaggttat
     2041 ctgatgctcc tagagcacct tctgacaggt ccctgtcacc tccatgggaa caagaacgca
     2101 ggatgacagc ccatccacca ccaggccaac catattctga tccagtgcca caaaggcaag
     2161 atagatttta ttccaattct ggtagactct ctgggccagc ggagctcaga agctataaca
     2221 tgccttcctt ggataaagtg gatgggccag tatcctcaga aatggaatcc agtagaaacg
     2281 ataccaaaga taatcttggt aactctaatg tgcctgattc tcctcacccc actgaaagtg
     2341 aagcagctgg ccgaggcttc atcccaccac catttccccc agtcagagcc ccattgtttc
     2401 cagtggatcc aaggagccag ttcatgagaa ggggcccctc ttttccccca cctcctccag
     2461 gaaacatcta tacagctcct cgagattatt ttccaccaag ggacttccct ggaccaccac
     2521 ttcctccgtt cccagggaga actgtgtacg caccaagggg ctttccacct ttccttcccc
     2581 caagagctgg gttcttcccc ccacctccac atcatgaaaa tcggagtgag ctcccgccag
     2641 acatgagtcc gccttcgaaa gaacctgcag ctgaccctcc agaaacacag gagacctgac
     2701 cgtgttgggt ctgtcggcag tcattgcctt ctcactttca gtttaagtaa ctgccgttac
     2761 ttacctgatt atatttttgc tcaaattgaa gcttaatgga attataattc tcaggatagt
     2821 attttgtaaa taaagatgat ttaaatatga atcttatgag taaattattt ccattttatt
     2881 ttattttaga tagtaactat cttactttga ttacctcatc tatagttatg cggttttata
     2941 tatgtaatct catagttggg gacatctcaa actcgaaagg ctgtgtcttt ataccgggaa
     3001 tgtgttcacc atggttgtag acaatgtaaa agtaactatg tttaatcaaa taaaatttta
     3061 attgatttaa a
//
