LOCUS       XM_006240128            3108 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MIA SH3 domain ER export factor 2
            (Mia2), transcript variant X10, mRNA.
ACCESSION   XM_006240128
VERSION     XM_006240128.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006240128.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006240128.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3108
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3108
                     /gene="Mia2"
                     /gene_synonym="Ctage5; Mgea6"
                     /note="MIA SH3 domain ER export factor 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 63 ESTs, 1 long SRA read, 14 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 176 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100912115"
                     /db_xref="RGD:6488546"
     CDS             229..2736
                     /gene="Mia2"
                     /gene_synonym="Ctage5; Mgea6"
                     /codon_start=1
                     /product="melanoma inhibitory activity protein 2 isoform
                     X10"
                     /protein_id="XP_006240190.1"
                     /db_xref="GeneID:100912115"
                     /db_xref="RGD:6488546"
                     /translation="MVCAGRQCIRDPRPALIAPGLLLAGGPAARPPPVGAEMAGPGAA
                     AGCARQVLEQLRRVVAALPEDMRADFNPNGFSLELAICVLTVGLLAIVLFLWRGFRSI
                     RSRFYVGREKKLALELSALIEEKCKLLEKVSFVQKEYEGLESSLKEASFEKESTEAQS
                     LEAAYENLERSKSKLEDEILLLEKKLEEERVKHSEQDELMADISKRIQSLEDESKSLK
                     SQVAEAKTTFRIFEINEERLRGAIKDALNENSQLQESQKQLLQEAEIMKEQVSDLDKQ
                     KVTLEESRAQAEQVLSEKETQIESLIKSLLKMKDWAAVLGDDTADDGNLDLDMKSGLE
                     DTASLDNQPKGALKKLIYAAKLNASLKALEGERNQIYTQLSEVDQIKEDLTEHIKSLE
                     SKQASLQSENTEFESESQRLQQKLKVITELYQENEMKLHRKLTVEENYRLEKEEKLSK
                     VDERISHAAEELETYRQRAKDLEEELERTIHSYQGQVISHEKKAHDNWLAARTLERNL
                     NDLRKENAHNRQKLTETEFKFELLEKDPYALDVPNTAFGREHSPYGPSPLGRPPSETR
                     AFLSPPTLLEGPLRLSPLLPGGGGRGSRGPENLLDHQMNTERGDSSYDRLSDAPRAPS
                     DRSLSPPWEQERRMTAHPPPGQPYSDPVPQRQDRFYSNSGRLSGPAELRSYNMPSLDK
                     VDGPVSSEMESSRNDTKDNLGNSNVPDSPHPTESEAAGRGFIPPPFPPVRAPLFPVDP
                     RSQFMRRGPSFPPPPPGNIYTAPRDYFPPRDFPGPPLPPFPGRTVYAPRGFPPFLPPR
                     AGFFPPPPHHENRSELPPDMSPPSKEPAADPPETQET"
ORIGIN      
        1 cggaactttt ttcactccgg gactgcaacg cggacctcgg ggtggaaggc tgctgcccca
       61 cgctcggatt cctcgtgcta cgaggttgaa gactggggag cggcgcacgg gccctttaag
      121 cttgagcgag gacgtggctg tcgagctcgt gcagtagagg gggcgtctcc gccgcgccgg
      181 cgagaccaag gccgggggtg cgacgcgggc tcccccctca gggccgcaat ggtgtgcgcc
      241 ggccgccagt gcattcgcga tcccagaccg gcgctgatcg cgccgggctt gctgctggcc
      301 ggcgggccgg ctgcaaggcc tccgcccgtg ggcgcggaga tggcggggcc cggggcggcg
      361 gcgggttgcg cgcggcaggt tctggagcag ctgcgcaggg ttgtggcagc attgcctgaa
      421 gatatgagag cagacttcaa tcccaatggt ttttcattgg aattggcgat atgtgtgctt
      481 accgttggac tgcttgcaat tgtcctgttt ctgtggagag gcttccgatc aattcgaagc
      541 cgattttatg tggggagaga aaaaaaactt gctcttgagc tttctgcact aattgaagaa
      601 aaatgcaaac tacttgaaaa agtcagcttt gttcaaaagg agtatgaagg cttagagtca
      661 tctttaaagg aggccagctt tgagaaggag tcaacagaag cacaaagttt ggaggcagcc
      721 tatgaaaatc tagaaagatc caaatctaaa cttgaagatg aaatactact cctagagaaa
      781 aagctagaag aagagagagt taaacattct gaacaggatg agttgatggc tgatatttca
      841 aaaaggatac agtccctaga agatgaatca aagtctctca aatcacaagt agctgaagcc
      901 aaaacgacct ttagaatatt tgaaatcaat gaagagcgac tcaggggagc aataaaagat
      961 gccttgaatg aaaattctca acttcaggaa agccagaaac agcttttaca ggaagctgaa
     1021 ataatgaaag aacaagtgag tgatctcgat aagcagaaag tgacattgga agagtccaga
     1081 gcacaggcag agcaagttct gagtgagaag gaaactcaga ttgagtctct gatcaaaagc
     1141 ctgctaaaga tgaaggattg ggctgctgtg cttggagacg acacagcaga tgatggaaat
     1201 ctggacctgg atatgaagag tggcctagaa gacactgctt ccttagataa tcagccaaag
     1261 ggagctttga agaagctgat ttatgcagcc aagttaaatg cttctttaaa agctctggaa
     1321 ggagaaagaa atcaaattta tactcagtta tctgaagtgg atcaaataaa agaagacctt
     1381 acagagcata tcaaaagtct tgagtctaaa caagcatcct tgcagtcaga aaacacagag
     1441 tttgaaagtg agagccagag acttcagcag aaactgaaag tcataactga gctgtaccaa
     1501 gaaaatgaga tgaagcttca caggaaatta acagtagagg aaaattaccg attagagaaa
     1561 gaagaaaaac tttccaaagt agatgagaga atcagccatg cggccgagga actggagacc
     1621 tacaggcagc gtgccaagga ccttgaagaa gaactggaga gaacaattca ttcttaccag
     1681 gggcaggtta tttctcatga aaaaaaagca catgataatt ggctggcagc tcggactctt
     1741 gaaagaaatc tcaatgattt aagaaaagag aatgcccaca acagacaaaa attaactgaa
     1801 acagagttta aatttgaact tttagaaaaa gatccttatg cacttgatgt tccaaataca
     1861 gcatttggca gagagcactc cccatatggt ccctcaccat tgggccgacc tccatctgaa
     1921 acgagagctt ttctctctcc tccaacgttg ttggagggtc cactcagact ctcccctttg
     1981 cttccagggg gaggaggaag aggctcacga ggccctgaga accttctgga ccatcagatg
     2041 aacactgaaa gaggagactc aagctatgac aggttatctg atgctcctag agcaccttct
     2101 gacaggtccc tgtcacctcc atgggaacaa gaacgcagga tgacagccca tccaccacca
     2161 ggccaaccat attctgatcc agtgccacaa aggcaagata gattttattc caattctggt
     2221 agactctctg ggccagcgga gctcagaagc tataacatgc cttccttgga taaagtggat
     2281 gggccagtat cctcagaaat ggaatccagt agaaacgata ccaaagataa tcttggtaac
     2341 tctaatgtgc ctgattctcc tcaccccact gaaagtgaag cagctggccg aggcttcatc
     2401 ccaccaccat ttcccccagt cagagcccca ttgtttccag tggatccaag gagccagttc
     2461 atgagaaggg gcccctcttt tcccccacct cctccaggaa acatctatac agctcctcga
     2521 gattattttc caccaaggga cttccctgga ccaccacttc ctccgttccc agggagaact
     2581 gtgtacgcac caaggggctt tccacctttc cttcccccaa gagctgggtt cttcccccca
     2641 cctccacatc atgaaaatcg gagtgagctc ccgccagaca tgagtccgcc ttcgaaagaa
     2701 cctgcagctg accctccaga aacacaggag acctgaccgt gttgggtctg tcggcagtca
     2761 ttgccttctc actttcagtt taagtaactg ccgttactta cctgattata tttttgctca
     2821 aattgaagct taatggaatt ataattctca ggatagtatt ttgtaaataa agatgattta
     2881 aatatgaatc ttatgagtaa attatttcca ttttatttta ttttagatag taactatctt
     2941 actttgatta cctcatctat agttatgcgg ttttatatat gtaatctcat agttggggac
     3001 atctcaaact cgaaaggctg tgtctttata ccgggaatgt gttcaccatg gttgtagaca
     3061 atgtaaaagt aactatgttt aatcaaataa aattttaatt gatttaaa
//
