LOCUS       XM_003750164            2893 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MIA SH3 domain ER export factor 2
            (Mia2), transcript variant X14, mRNA.
ACCESSION   XM_003750164
VERSION     XM_003750164.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003750164.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003750164.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2893
                     /gene="Mia2"
                     /gene_synonym="Ctage5; Mgea6"
                     /note="MIA SH3 domain ER export factor 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 65 ESTs, 1 long SRA read, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 147 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100912115"
                     /db_xref="RGD:6488546"
     CDS             131..2521
                     /gene="Mia2"
                     /gene_synonym="Ctage5; Mgea6"
                     /codon_start=1
                     /product="melanoma inhibitory activity protein 2 isoform
                     X14"
                     /protein_id="XP_003750212.1"
                     /db_xref="GeneID:100912115"
                     /db_xref="RGD:6488546"
                     /translation="MELEGLGDEVVAALPEDMRADFNPNGFSLELAICVLTVGLLAIV
                     LFLWRGFRSIRSRFYVGREKKLALELSALIEEKCKLLEKVSFVQKEYEGLESSLKEAS
                     FEKESTEAQSLEFVEGSQISEAAYENLERSKSKLEDEILLLEKKLEEERVKHSEQDEL
                     MADISKRIQSLEDESKSLKSQVAEAKTTFRIFEINEERLRGAIKDALNENSQLQESQK
                     QLLQEAEIMKEQVSDLDKQKVTLEESRAQAEQVLSEKETQIESLIKSLLKMKDWAAVL
                     GDDTADDGNLDLDMKSGLEDTASLDNQPKGALKKLIYAAKLNASLKALEGERNQIYTQ
                     LSEVDQIKEDLTEHIKSLESKQASLQSENTEFESESQRLQQKLKVITELYQENEMKLH
                     RKLTVEENYRLEKEEKLSKVDERISHAAEELETYRQRAKDLEEELERTIHSYQGQVIS
                     HEKKAHDNWLAARTLERNLNDLRKENAHNRQKLTETEFKFELLEKDPYALDVPNTAFG
                     REHSPYGPSPLGRPPSETRAFLSPPTLLEGPLRLSPLLPGGGGRGSRGPENLLDHQMN
                     TERGDSSYDRLSDAPRAPSDRSLSPPWEQERRMTAHPPPGQPYSDPVPQRQDRFYSNS
                     GRLSGPAELRSYNMPSLDKVDGPVSSEMESSRNDTKDNLGNSNVPDSPHPTESEAAGR
                     GFIPPPFPPVRAPLFPVDPRSQFMRRGPSFPPPPPGNIYTAPRDYFPPRDFPGPPLPP
                     FPGRTVYAPRGFPPFLPPRAGFFPPPPHHENRSELPPDMSPPSKEPAADPPETQET"
ORIGIN      
        1 aacaggatca cacagtgtgt ggaaacagga gtgcagaagg tattaaatct ggactctttc
       61 tcaaggagat gaagtattca ggaggggtgt atttacatgt tctagtatgt taacatgaac
      121 ttcctaagaa atggaattgg aaggtctggg tgacgaggtt gtggcagcat tgcctgaaga
      181 tatgagagca gacttcaatc ccaatggttt ttcattggaa ttggcgatat gtgtgcttac
      241 cgttggactg cttgcaattg tcctgtttct gtggagaggc ttccgatcaa ttcgaagccg
      301 attttatgtg gggagagaaa aaaaacttgc tcttgagctt tctgcactaa ttgaagaaaa
      361 atgcaaacta cttgaaaaag tcagctttgt tcaaaaggag tatgaaggct tagagtcatc
      421 tttaaaggag gccagctttg agaaggagtc aacagaagca caaagtttgg agtttgttga
      481 aggatcacaa atatcagagg cagcctatga aaatctagaa agatccaaat ctaaacttga
      541 agatgaaata ctactcctag agaaaaagct agaagaagag agagttaaac attctgaaca
      601 ggatgagttg atggctgata tttcaaaaag gatacagtcc ctagaagatg aatcaaagtc
      661 tctcaaatca caagtagctg aagccaaaac gacctttaga atatttgaaa tcaatgaaga
      721 gcgactcagg ggagcaataa aagatgcctt gaatgaaaat tctcaacttc aggaaagcca
      781 gaaacagctt ttacaggaag ctgaaataat gaaagaacaa gtgagtgatc tcgataagca
      841 gaaagtgaca ttggaagagt ccagagcaca ggcagagcaa gttctgagtg agaaggaaac
      901 tcagattgag tctctgatca aaagcctgct aaagatgaag gattgggctg ctgtgcttgg
      961 agacgacaca gcagatgatg gaaatctgga cctggatatg aagagtggcc tagaagacac
     1021 tgcttcctta gataatcagc caaagggagc tttgaagaag ctgatttatg cagccaagtt
     1081 aaatgcttct ttaaaagctc tggaaggaga aagaaatcaa atttatactc agttatctga
     1141 agtggatcaa ataaaagaag accttacaga gcatatcaaa agtcttgagt ctaaacaagc
     1201 atccttgcag tcagaaaaca cagagtttga aagtgagagc cagagacttc agcagaaact
     1261 gaaagtcata actgagctgt accaagaaaa tgagatgaag cttcacagga aattaacagt
     1321 agaggaaaat taccgattag agaaagaaga aaaactttcc aaagtagatg agagaatcag
     1381 ccatgcggcc gaggaactgg agacctacag gcagcgtgcc aaggaccttg aagaagaact
     1441 ggagagaaca attcattctt accaggggca ggttatttct catgaaaaaa aagcacatga
     1501 taattggctg gcagctcgga ctcttgaaag aaatctcaat gatttaagaa aagagaatgc
     1561 ccacaacaga caaaaattaa ctgaaacaga gtttaaattt gaacttttag aaaaagatcc
     1621 ttatgcactt gatgttccaa atacagcatt tggcagagag cactccccat atggtccctc
     1681 accattgggc cgacctccat ctgaaacgag agcttttctc tctcctccaa cgttgttgga
     1741 gggtccactc agactctccc ctttgcttcc agggggagga ggaagaggct cacgaggccc
     1801 tgagaacctt ctggaccatc agatgaacac tgaaagagga gactcaagct atgacaggtt
     1861 atctgatgct cctagagcac cttctgacag gtccctgtca cctccatggg aacaagaacg
     1921 caggatgaca gcccatccac caccaggcca accatattct gatccagtgc cacaaaggca
     1981 agatagattt tattccaatt ctggtagact ctctgggcca gcggagctca gaagctataa
     2041 catgccttcc ttggataaag tggatgggcc agtatcctca gaaatggaat ccagtagaaa
     2101 cgataccaaa gataatcttg gtaactctaa tgtgcctgat tctcctcacc ccactgaaag
     2161 tgaagcagct ggccgaggct tcatcccacc accatttccc ccagtcagag ccccattgtt
     2221 tccagtggat ccaaggagcc agttcatgag aaggggcccc tcttttcccc cacctcctcc
     2281 aggaaacatc tatacagctc ctcgagatta ttttccacca agggacttcc ctggaccacc
     2341 acttcctccg ttcccaggga gaactgtgta cgcaccaagg ggctttccac ctttccttcc
     2401 cccaagagct gggttcttcc ccccacctcc acatcatgaa aatcggagtg agctcccgcc
     2461 agacatgagt ccgccttcga aagaacctgc agctgaccct ccagaaacac aggagacctg
     2521 accgtgttgg gtctgtcggc agtcattgcc ttctcacttt cagtttaagt aactgccgtt
     2581 acttacctga ttatattttt gctcaaattg aagcttaatg gaattataat tctcaggata
     2641 gtattttgta aataaagatg atttaaatat gaatcttatg agtaaattat ttccatttta
     2701 ttttatttta gatagtaact atcttacttt gattacctca tctatagtta tgcggtttta
     2761 tatatgtaat ctcatagttg gggacatctc aaactcgaaa ggctgtgtct ttataccggg
     2821 aatgtgttca ccatggttgt agacaatgta aaagtaacta tgtttaatca aataaaattt
     2881 taattgattt aaa
//
