LOCUS       NM_001107068            3947 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus alpha-1,6-mannosylglycoprotein
            6-beta-N-acetylglucosaminyltransferase B (Mgat5b), mRNA.
ACCESSION   NM_001107068 XM_001081732 XM_221136
VERSION     NM_001107068.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3947)
  AUTHORS   Alvarez-Manilla,G., Troupe,K., Fleming,M., Martinez-Uribe,E. and
            Pierce,M.
  TITLE     Comparison of the substrate specificities and catalytic properties
            of the sister N-acetylglucosaminyltransferases, GnT-V and GnT-Vb
            (IX)
  JOURNAL   Glycobiology 20 (2), 166-174 (2010)
   PUBMED   19846580
REFERENCE   2  (bases 1 to 3947)
  AUTHORS   Inamori,K., Mita,S., Gu,J., Mizuno-Horikawa,Y., Miyoshi,E.,
            Dennis,J.W. and Taniguchi,N.
  TITLE     Demonstration of the expression and the enzymatic activity of
            N-acetylglucosaminyltransferase IX in the mouse brain
  JOURNAL   Biochim Biophys Acta 1760 (4), 678-684 (2006)
   PUBMED   16413118
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_221136.4, XM_001081732.1.
FEATURES             Location/Qualifiers
     source          1..3947
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.2"
     gene            1..3947
                     /gene="Mgat5b"
                     /note="alpha-1,6-mannosylglycoprotein
                     6-beta-N-acetylglucosaminyltransferase B"
                     /db_xref="GeneID:303693"
                     /db_xref="RGD:1305188"
     exon            1..187
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            188..286
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            287..399
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            400..547
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            548..743
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            744..856
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            857..1027
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     CDS             860..2710
                     /gene="Mgat5b"
                     /EC_number="2.4.1.155"
                     /note="N-acetylglucosaminyltranferase VB; mannoside
                     acetylglucosaminyltransferase 5, isoenzyme B; mannosyl
                     (alpha-1,6-)-glycoprotein
                     beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B"
                     /codon_start=1
                     /product="alpha-1,6-mannosylglycoprotein
                     6-beta-N-acetylglucosaminyltransferase B"
                     /protein_id="NP_001100538.1"
                     /db_xref="GeneID:303693"
                     /db_xref="RGD:1305188"
                     /translation="MRARWTSDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTA
                     TRTAHKSLPRVQAMFRSNLSHLLELMGSGKESLIFMKKRTRRFTAQWTKAAKYLAQKL
                     GDIRRDQKQILVHIGFLTEESGDVFSPRVLKGGPLGEMVQWADILAALYMLGHSLRVT
                     VSLKELQSNLGVPPGRGNCPLTVPLPFDLIYTDYHGLQQMKQYMGLSFKKYRCRIRVI
                     DTFGTEPAYNHEEYATLHGYRTNWGYWNLNPKQFMTMFPHTPDNSFMGFVSEELNETE
                     KQLIKDGKASNMAVVYGKEASIWKGKEKFLAILNKYMEIHGTVYYESQRPPEVPAFVK
                     NHGLLPQPEFQQLLRKAKLFIGFGFPYEGPAPLEAIANGCIFLQSRFSPPHSSLNHEF
                     FRGKPTSREVFSQHPYAENFIGKPHVWTVDYNNSDEFEATIKAIMNTQVDPYLPYEYT
                     CVGMLERINAYIQHQDFCGGPSPVPLGSNTAQSLFVLAPNATHLEWAQNISSVPGAWP
                     PPHSLRAWLAAPGRACTDACLDHGLVCEPSFFPFLNSQDAFLRLQVPCDSTEWEMHHL
                     YPAFAQPGQECYLQKEPLLFSCAGASTKYQRLCPCRDFRKGQVALCQGCL"
     exon            1028..1192
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1193..1362
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1363..1494
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1495..1628
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1629..1759
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1760..1915
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            1916..2062
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            2063..2179
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            2180..2254
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            2255..2511
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
     exon            2512..3947
                     /gene="Mgat5b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcctcgggtt gtagcgccgc gcgggacccc ggagcccgga gcccggagcc cggagcgcgg
       61 acggctgagc gagcggtcga gcggtcgagc gggcgggcga gggcgagggc aggcgagcgc
      121 gcagaggtcc ctccccaaag ccatgggcgc ggcgcggcgc gcggctgcag agcggcgcgg
      181 tcggaagggg gtgcaagttc gggtgtcaga ggaggcttgt agtctattct cgatgagggc
      241 catgggcacg gggaaacgga attagatggt gtgtgtgtgt gtgtgtgctg tttgtcctgg
      301 gtattggctt ctttactctc tgctttctga tgacatcttt gggaggccag ttctctgccc
      361 ggcgcctggg ggactcaccc ttcaccatcc gcacagaagt gccaggcggc cccgagtccc
      421 gaggcgccct tcgcaagatg agcgacctgc tggagctgat gatgaagagg atggacatgc
      481 tggccaggct ggagaatagc agtgagctgc accgggctgc cagtgtcgcg cacttagctg
      541 cggacaggct caccccaggg gccagcctca ttgaaaggat ccaggccatt gcccagaacg
      601 tgtctgacat cgctgtgaag gtggaccaga tcctgcgcca cagcctgatt ctgcatagca
      661 agggtgggtg cgtcagagcc aggacactgc actgtgtccc cagaggccag tgtgtgtgtg
      721 tgtgtgtgtg tgtgtgtgtg tgtgccccag tgtctcagta agccatcttc tgttttttgc
      781 agtgtctgaa ggtcggaggg accagtgtga agcacccagt gaccccaagt tccctgactg
      841 ttcggggaaa gtggagtgga tgcgtgcccg ctggacctct gacccctgct acgccttctt
      901 tggagtagac ggcaccgagt gctccttcct catctacctc agtgaggttg agtggttctg
      961 ccccccgctt ccctggagga accagacagc cacccggaca gcccacaagt cccttcccag
     1021 agtccaggct atgttccgga gcaacctgtc ccacctcctg gagctgatgg gcagtgggaa
     1081 ggagtccctt atcttcatga agaagcgaac caggcggttc accgcacagt ggaccaaagc
     1141 tgccaagtac ctagcacaga agctggggga catccggagg gaccagaagc aaatccttgt
     1201 ccacatcggc ttcctgacag aggagtctgg ggacgtgttc agcccaaggg tgctgaaggg
     1261 cgggcctctg ggagagatgg tgcagtgggc agacattctg gctgctctgt acatgctggg
     1321 ccacagcctg cgggtcacag tttccctgaa ggagctgcag agtaacttag gggtgccgcc
     1381 aggccggggg aactgcccac tcaccgtacc tctgcctttt gacctcatct acacggacta
     1441 tcatggcctg cagcagatga aacagtacat ggggctgtcc ttcaagaagt accggtgcag
     1501 aatccgagtg atcgacacct tcgggacgga gccagcgtac aaccatgagg agtatgccac
     1561 actgcatggc taccggacca actgggggta ctggaacctc aaccccaagc agttcatgac
     1621 catgttccct cacaccccag acaactcctt catgggcttc gtgtctgagg agctcaatga
     1681 gaccgagaag cagctcatca aagatggcaa agccagcaac atggcagtgg tgtacggcaa
     1741 ggaggcgagt atctggaagg gcaaggagaa gttcctggcc atcctcaaca agtacatgga
     1801 gatccacggt accgtgtact atgagagcca gcggccaccc gaggtccctg cctttgtgaa
     1861 gaaccatggc cttctgccac agcctgagtt ccagcagctg ctgcgtaagg ccaagctctt
     1921 tatagggttc ggattcccct acgagggccc agcaccactg gaggccatcg ccaacggctg
     1981 catcttccta cagtctcgat tcagcccacc ccacagctcc ctcaaccacg agttcttccg
     2041 gggcaagccc acctccaggg aggtgttctc ccagcatccc tatgcagaga acttcatcgg
     2101 caagcctcat gtgtggaccg tggactataa caactccgat gagtttgaag ctaccattaa
     2161 ggccatcatg aacacccagg tggacccgta tctgccctat gagtacacct gtgtggggat
     2221 gctggaacgg atcaacgcct acatccaaca ccaggacttc tgtgggggtc ccagccctgt
     2281 tccactgggg tccaacactg cccagagtct ctttgtctta gcccctaatg caactcatct
     2341 cgagtgggcc cagaacatca gctccgttcc gggagcctgg ccccctcccc actctctgcg
     2401 ggcctggctg gcagcccctg gaagggcctg cacggacgcc tgcctggacc acggactagt
     2461 gtgcgagcct tcattcttcc ctttcctcaa cagccaagat gcgttcctca ggctgcaggt
     2521 gccctgtgac agcacagagt gggagatgca tcacttgtac cccgcctttg cccagccggg
     2581 ccaagagtgc tacctacaga aagagccgct gctcttcagc tgtgcaggcg ccagcaccaa
     2641 gtaccagagg ctctgtccct gccgtgactt ccgcaagggc caggtggcct tgtgccaggg
     2701 ctgcctgtga ggccagagac accctgccca gaacctgccc accgcggttg gcaagcacca
     2761 gcactttctg agctctagcc agacactgcg tgtctcttgg ctgcagcttc ctccccggcc
     2821 aaggggggga agaggaagct gaagagacag cagctccgag cctgcagctc cttcctaggg
     2881 gcctccttgc ctctccatag gacctgaggc caagcagttg ggctgaccac gtgtccggtg
     2941 tgcccaggat ggaggctctt ggctttctgt gatctggacc tgctggagac acggccttgg
     3001 ccattcttgg gcctagcata ggccttctga tccacgaggc tggaaacatg gccatgctgc
     3061 cccctagttc accagagggg tcaagggaaa gggaccaggc cacatccaca cttgctgtga
     3121 gggccacacg tgaggcagca actcatgcag ggccagtatg gcctccccag ttgttggggg
     3181 tcaacaaaga gactgagagc tcagggaggc caggggaggg gctctgccct cctccaagtc
     3241 cacctccctg ttgctcaatc ctgcttcctc cagcagactt cccgctgggt ctcttctgac
     3301 acccagttct ggcatgacct gggactggtc cacagtcttc gtctctgccc ctctggtggc
     3361 cacctccacc ctagcttctg acaacaggtc ccagacccca ccaaggcatc ctctgcagac
     3421 tctcacacca ctcccagccc tcaggcatct catgccggcc aggctgggat gaagtttcac
     3481 ccacggtaca ctaggctggt tccgatacac aggtccacca gacgtccctt ggctcccacc
     3541 catctagggc ccatacttgt tcctccctcc tgtttcctcc aggccctggc cacttcagta
     3601 cactcagact tcagtaccca tctctgtgtg gcatgcccac ctccagtcca gggtaacttc
     3661 cctctcccac ccccagggcc agccaggctc ccaggaacac tgccatcgct catatacggt
     3721 cctctcccgg gccacctggg cccagacagt tgtaggaagg gaccgtcctg catgggactt
     3781 gttgatgccc cctggcctgg ttggcccctg tggcagcaga acccacagca gcaagagacc
     3841 agtggttccg aggatctgac tgtcggagga aagcaataga gacactcttc tctctttttt
     3901 ttaaagattt atttcttgaa ataaatattt tattgggatg tgaaatg
//
