LOCUS       XM_008769575            1788 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MGAT4 family, member E (Mgat4e), mRNA.
ACCESSION   XM_008769575
VERSION     XM_008769575.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jun 15, 2023 this sequence was replaced by
            NM_001422553.1.
            
            On Jan 21, 2021 this sequence version replaced XM_008769575.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1788
                     /gene="Mgat4e"
                     /note="MGAT4 family, member E; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 2 Proteins, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:289038"
                     /db_xref="RGD:1308112"
     CDS             442..1788
                     /gene="Mgat4e"
                     /codon_start=1
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase-like protein
                     MGAT4E"
                     /protein_id="XP_008767797.2"
                     /db_xref="GeneID:289038"
                     /db_xref="RGD:1308112"
                     /translation="MRCFIRHFFRVSVALMVLWFLIVLHVPEENKDVKTMVIKHGSKN
                     SKSLNSWQSITSKYLKEIHQRRKTWLTVGITSESGHGQNGLLDTLASLYHASSTSEQR
                     QMTVLVHLADSDPTWLKRTIFRISSLYRSQILTGQLLLIHAPPDAYPTVSNVQKEISQ
                     GQIYSKQNVDHAFLMSFATKLSPYFLLIEDDVFCAPNFVDHIRSKVIGRKPNTWVLLE
                     FSNMGILGKLLHSKDLPLLTRFLLLFHKERPLDWLIRHFCTLLAQQSPILYRPFLFYH
                     RLTHSTFTNNVTDQEQDLPCPDSLTGTVFTDMRFSDVHSPQAAYTLDESFFWSYNVST
                     GNYLILILNNPANLDRVQVRTGSIMDGKYILEKGQVELGYEPEGTPPNCTSFTLLGHL
                     VQGQMDQIILKSAGSEVSCVKLAVNANQVGGLMVRHIYIWGENAKSEENNQRYDKW"
ORIGIN      
        1 agcaaagctc cgtgtgatgg agctggcgcc atggttctct gtgctgtggt ctctgcgtct
       61 cttttctccc ttcaaggaga gctgctgctg cttttcaggc caaataataa tttgtagaga
      121 gggattgtga agcacacact catcacatgt atcctgtacc tgtgcccctc tgatgctgtg
      181 agtgggggac tgggacacaa tagtaacatc acagagggag ctgagctcag gggagtaagc
      241 agcagagacc tcaggctctg tccctaactc ctacagtgac tacagtgact gactcccgtt
      301 ccagcccctc ttgctctttg tcctgccttt tccagaacag tgttgacctg agagggctga
      361 ataagaaaag aattccctga tgccccaagc tgtcactgga aggaacgaag ggaactgagg
      421 agcccgaccc cagcagacac aatgcgctgt ttcatcagac atttcttcag agtctctgtg
      481 gccctcatgg tcctgtggtt cctcatcgtc ctgcacgtcc cagaggaaaa caaagatgtc
      541 aaaactatgg tgatcaagca tggcagtaag aactccaaat cactaaacag ctggcagagc
      601 atcacttcca agtacctgaa agaaatccat cagagaagaa agacatggtt gacagtgggg
      661 atcacctcag agtcaggaca cggtcaaaat ggcctcctgg ataccctggc ctccctgtac
      721 cacgcctcct ccacgtctga gcagagacaa atgactgtgc tggtccacct ggccgactct
      781 gaccccacct ggctcaagag aactatcttc cgcatttcaa gtctctacag gtcccagatt
      841 ttgacagggc aattactact gatccatgcc ccacctgatg cctaccccac tgtgtctaat
      901 gtccagaagg agatctctca ggggcagatc tactccaagc agaatgtaga tcacgctttc
      961 ctcatgagct ttgctacaaa gctctcccct tacttcctgt tgatagagga cgatgtcttt
     1021 tgtgccccca attttgtcga ccacattcgc tcaaaggtga tcggcaggaa gcccaacaca
     1081 tgggtgctcc tggagttctc taatatgggc atcctgggta aacttctcca cagcaaggac
     1141 cttccactcc tgacccgttt cctcctcctc ttccacaagg agcgacctct cgactggctg
     1201 atccgtcatt tctgtaccct cttggcccag caaagtccaa tcctctacag accctttctc
     1261 ttctaccata ggttgactca ctccactttc acaaacaacg taacagacca ggaacaagat
     1321 cttccttgtc ccgatagcct cactggaact gttttcacag acatgaggtt ctctgatgtt
     1381 cattccccgc aggcggccta cactctggac gagtctttct tttggtccta caatgtcagt
     1441 acagggaact acttgatctt gattttgaac aatccagcga acctcgacag agtgcaagta
     1501 agaacaggct ccatcatgga tggaaagtac atcctagaga aaggacaggt ggaactaggc
     1561 tacgagcctg agggaacgcc cccgaactgc accagcttta ccctgcttgg ccatcttgtg
     1621 caggggcaga tggatcagat catcctgaaa agcgctgggt ctgaagtaag ctgcgtgaag
     1681 ctggcagtga acgctaatca ggtcggtggt ctcatggtca ggcatatcta catctggggg
     1741 gagaatgcga agtcagaaga aaataatcaa agatatgata agtggtga
//
