LOCUS       NM_001025666            1377 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus MGAT4 family, member D (Mgat4d), mRNA.
ACCESSION   NM_001025666 XM_222484
VERSION     NM_001025666.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Huang,H.H. and Stanley,P.
  TITLE     A testis-specific regulator of complex and hybrid N-glycan
            synthesis
  JOURNAL   J Cell Biol 190 (5), 893-910 (2010)
   PUBMED   20805325
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097408.1.
            
            On Jul 22, 2005 this sequence version replaced XM_222484.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097408.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132263 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q11"
     gene            1..1377
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /note="MGAT4 family, member D"
                     /db_xref="GeneID:304646"
                     /db_xref="RGD:1310572"
     exon            1..168
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..1193
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /note="glycosyltransferase 54 domain-containing protein;
                     alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase-like protein
                     MGAT4D"
                     /codon_start=1
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D
                     precursor"
                     /protein_id="NP_001020837.1"
                     /db_xref="GeneID:304646"
                     /db_xref="RGD:1310572"
                     /translation="MKTKNVNLLFALVAVLLFGFSCFCISRMNQTNNQLINCRNHVLE
                     FKETMLRLKNKSENNHQNLVKVLHQLKHKVAPAKPSGSILEKKVNMLDQDETVFNQFE
                     VLKFFLPHLRTAGNIYPDIAIGRQRAGVSFALGITTIDRGNHTYLKQTLTSVLSRMTP
                     EEEEDSVVIVSVADTDENYLKSVVHMVKTRFRKQVQSGALEVISIPALFYPQTLLEKK
                     TTKNAKNWQIKQVLDFCILMLYAQPKATYYLQLEDDIVAKKMYFTKMKDFVNSVTSKD
                     WFYIEFSVLGFIGKLFRSKDLMDFVHFFLIFYRAKPIDVLLDDIALLRMCSFGGPLRS
                     CLQLKREVRVQYKPSLFQHVGTHSSFPGREQHLKDHYY"
     exon            169..324
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            325..462
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            463..596
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            597..643
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            644..748
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            749..824
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            825..939
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            940..1070
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            1071..1178
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
     exon            1179..1350
                     /gene="Mgat4d"
                     /gene_synonym="GL54D; RGD1310572"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggacagcc taggtgtgaa gcctggagtt ggcggtgaca cctgttcacc tccactggct
       61 ctgacgccag cgcaatgaag accaagaacg ttaacttgct cttcgctctc gttgctgtcc
      121 tgctctttgg cttctcgtgt ttctgcatct ccaggatgaa ccaaaccaat aatcagctaa
      181 ttaactgcag aaaccacgtt ttggagttca aggaaactat gctacgttta aaaaacaaaa
      241 gtgaaaataa tcaccaaaat ctagtgaaag tcctccatca actgaagcat aaagtggccc
      301 cagcgaagcc gtcaggaagc atccttgaga agaaagtgaa catgttggat caggatgaaa
      361 cagtttttaa ccaatttgaa gtcttaaagt tcttccttcc tcacctaagg acagcaggga
      421 acatttaccc ggatatagcc attggcagac agagagcagg cgtctctttt gcactgggaa
      481 tcaccaccat tgacagaggg aatcacacct acctgaagca aacgctgact tctgttctct
      541 ccagaatgac tcctgaagaa gaggaggact ccgtggtgat cgtctctgtg gctgatactg
      601 atgaaaatta tttaaaatct gttgttcaca tggttaaaac cagattcaga aagcaagtac
      661 agtccggagc tttggaggtc atttcaatac ctgccctttt ttaccctcaa acattactgg
      721 aaaagaaaac aacgaagaat gcaaaaaatt ggcagataaa acaagtattg gatttttgta
      781 ttctgatgtt gtacgcacaa cccaaggcca cgtattattt acagctggaa gatgatatcg
      841 tagcaaaaaa gatgtatttt acaaaaatga aagattttgt aaatagtgtc acttcaaaag
      901 attggtttta tattgagttt tcagtccttg gatttatagg gaaactcttt cgatcgaagg
      961 acctgatgga ctttgtgcat tttttcttga tattctacag agcaaagccc atagatgtgc
     1021 ttttagatga cattgccctg cttcggatgt gcagcttcgg ggggcctctg aggagctgtt
     1081 tgcagctaaa gagggaagtt cgagttcagt acaaaccatc tctgttccag catgtgggca
     1141 ctcactcatc atttccagga cgagaacagc acctcaagga tcattactac taggattttc
     1201 ctaaatctta caacttctcc aaaaattgcc agactcattt ttgggaaaaa ggcacagcaa
     1261 atatcaaatt ttctccagtt acattgaaga agagactaca ctattttttt ttaaattaaa
     1321 ccttcagtaa taaagtgagt ataaaaattt aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
