LOCUS       NM_001135814            2556 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus MGAT4 family, member C (Mgat4c), mRNA.
ACCESSION   NM_001135814 XM_001080664 XM_235099
VERSION     NM_001135814.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from CH473960.2.
            
            On or before Oct 16, 2008 this sequence version replaced
            XM_235099.4, XM_001080664.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760393,
                              SAMN14984024 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q21"
     gene            1..2556
                     /gene="Mgat4c"
                     /gene_synonym="RGD1307871"
                     /note="MGAT4 family, member C"
                     /db_xref="GeneID:299756"
                     /db_xref="RGD:1307871"
     exon            1..204
                     /gene="Mgat4c"
                     /gene_synonym="RGD1307871"
                     /inference="alignment:Splign:2.1.0"
     exon            205..254
                     /gene="Mgat4c"
                     /gene_synonym="RGD1307871"
                     /inference="alignment:Splign:2.1.0"
     exon            255..407
                     /gene="Mgat4c"
                     /gene_synonym="RGD1307871"
                     /inference="alignment:Splign:2.1.0"
     CDS             261..1697
                     /gene="Mgat4c"
                     /gene_synonym="RGD1307871"
                     /EC_number="2.4.1.145"
                     /note="mannosyl (alpha-1,3-)-glycoprotein
                     beta-1,4-N-acetylglucosaminyltransferase, isozyme C
                     (putative)"
                     /codon_start=1
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase C"
                     /protein_id="NP_001129286.1"
                     /db_xref="GeneID:299756"
                     /db_xref="RGD:1307871"
                     /translation="MFKFYQMKYIFQILDKMRCLRKRSTVSFLGVLVVFLLFMNVFIE
                     DSYVLEGDKQLIRETSTHQLNSERYVHTFKDLSNFSGTINVTYRYLAATPLQRKRYLT
                     IGLSSVKRKKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKF
                     AHHIIAGRLMVIHAPEEYYPVLDGLKRNYNDPEDRVRFRSKQNVDYAFLLNFCANTSD
                     YYVMLEDDVRCSRNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFL
                     LMFYQEMPCDWLLTHFRGLLAQKNVIRFKPSLFQHMGYYSSYKGTENKLKDDDFEEES
                     FDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDTFVIVFENPIKIKKI
                     KVNTGTEDRQNDILHHGALDVGEKLIFSKQIRQCETYLRLGEFKNGNFEMSDVNQKIP
                     FDIHCMRICVTKTQKEWLIIRSISIWTS"
     exon            408..555
                     /gene="Mgat4c"
                     /gene_synonym="RGD1307871"
                     /inference="alignment:Splign:2.1.0"
     exon            556..2556
                     /gene="Mgat4c"
                     /gene_synonym="RGD1307871"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgacatcat cttccagtcg gagtacacag aacagctgag gcagcgttca gtttcagccc
       61 gagtgctatt atgatggatg tttacatgtc ttcattgaga gccaattatc ttgcttttgt
      121 gtgaggccca aggatcactc atgctgccag gctgcacaga gcactgttgg atctagctga
      181 acgaattgtt tttctctgtc tccgggtgac aatagctttt atacaggaca gattatgtca
      241 gcttctttct taaggagagg atgtttaaat tttatcaaat gaaatatatt tttcaaatat
      301 tggataaaat gagatgcttg cgaaaacgtt ctacagtgtc attcttggga gtccttgttg
      361 tttttcttct attcatgaat gtgttcattg aagatagcta tgttctggaa ggcgacaagc
      421 aacttataag ggaaacatca acacatcaac ttaattctga acgctatgtt cataccttca
      481 aggatttatc aaacttctca ggaactataa atgtcaccta tcgctacctg gctgccacac
      541 ctttacagag aaagcgatat ctcacaattg gactttcatc agtaaaacgg aaaaaaggaa
      601 attatttact tgagacaatc aagtcaattt ttgaacagtc cagctatgaa gaactaaaag
      661 aaatttcagt tgtagtgcat ctagcagact ttaattcatc atggcgtgat gccatggtcc
      721 aagatattac acagaaattt gcccatcata ttattgcagg aagattaatg gttatacatg
      781 ctcctgaaga atattatcca gttctggatg gtcttaaaag aaattacaat gacccagaag
      841 atagagtcag atttcgctcc aagcaaaatg tagattatgc ttttctgcta aatttctgtg
      901 ccaatacttc tgactattat gtaatgcttg aagatgatgt ccggtgttcc agaaatttct
      961 taactgccat caagaaagtt atcgcatcct tagaaggaac atactgggta actcttgagt
     1021 tctctaaact tggctacatt ggaaaactct atcattctca tgatctccca cgtctggccc
     1081 atttcttatt aatgttttat caagaaatgc cttgtgactg gctattgact catttccgag
     1141 ggctgctggc tcagaaaaat gtgattcgat ttaaaccttc tctctttcag cacatggggt
     1201 attattcatc ctataaagga acggagaata aactgaagga tgatgacttt gaagaggagt
     1261 catttgacat ccctgataac ccaccagcaa gtctctacac caacatgaat gtctttgaaa
     1321 attacgaagc aagcaaggct tacagtagtg ttgatgagta cttttgggga aagccacctt
     1381 caacggggga tacgtttgtt attgtatttg agaatcctat taaaattaaa aaaattaagg
     1441 tgaatactgg aacagaagac cggcagaatg acattttgca tcacggagcc ctagatgttg
     1501 gggaaaaact catttttagc aaacaaataa gacaatgtga aacttactta agactagggg
     1561 aattcaaaaa tggaaacttt gaaatgtcag atgtgaatca aaaaattccc tttgacatac
     1621 attgcatgag gatatgtgtc accaaaactc agaaagaatg gttgataatt aggagcatca
     1681 gcatttggac ttcctagcca agtaaatcag tagattgagt ttctgaaaca ggtcttcctg
     1741 tttcaatttt tgctattccc tcttttgcta cttttgtctt ttggagggta actaattggt
     1801 gtgctgtggc acaagaacgt tgagtcatct cagcagtttt gattgtagtt ttactaagca
     1861 catctttgta attaatttca cgtttcaggc tgaatatcat tctgtagtta aaactgattt
     1921 cactcattca tttaaatgtt catagttcca aatttcaact cattgtgcaa agagttgata
     1981 atttatttta tgtttagaaa gattcttagt aagaatatat gagaatatgc agattggttg
     2041 ccatcataaa atgggatact ttttcttata aatttaggct ttcactgact gatgtatttc
     2101 tacaattaat acctcctcat ggaagtggtg tctttacaac agattagttg tgtaagtaga
     2161 gctttgaaaa aacagactta aaagtcatca ttcctttggt tatttctatg aaaaggaaca
     2221 ttgctcattg ttttaaaaca tttaattgag cacatgttaa tacaattccc atgagaataa
     2281 gtctatttct aatttccctt ttgaaaatat atagttaagc tcaatatttt aaggttatat
     2341 tggatatctg taattaatag aggaagagag atggcttacc gttagttcat tcatacattt
     2401 tcagtatatg tagaaaaaac tgaaattgat gtttttactt tttgtattaa aactcatgtg
     2461 attaaaattg ttgtaattta tcatatttgg ggaagattaa atggctgtct tatgtgggag
     2521 aaaagtaaaa tttaaagtaa ctaagtttag gttttt
//
