LOCUS       NM_001108215            3139 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus major facilitator superfamily domain containing 9
            (Mfsd9), mRNA.
ACCESSION   NM_001108215 XM_001059451 XM_237091
VERSION     NM_001108215.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473965.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_237091.4, XM_001059451.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132270,
                              SAMD00132272 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q22"
     gene            1..3139
                     /gene="Mfsd9"
                     /gene_synonym="RGD1562212"
                     /note="major facilitator superfamily domain containing 9"
                     /db_xref="GeneID:316356"
                     /db_xref="RGD:1562212"
     exon            1..194
                     /gene="Mfsd9"
                     /gene_synonym="RGD1562212"
                     /inference="alignment:Splign:2.1.0"
     CDS             60..1460
                     /gene="Mfsd9"
                     /gene_synonym="RGD1562212"
                     /codon_start=1
                     /product="major facilitator superfamily domain-containing
                     protein 9"
                     /protein_id="NP_001101685.1"
                     /db_xref="GeneID:316356"
                     /db_xref="RGD:1562212"
                     /translation="MALGVRGRGASGQDLTSETPVTATASSSAVSSRRFLLWLYLVGF
                     LDLFGVSMTVPLLNLHVRSLGVSPVVAGIVGSSYGILQLFSSTFVGCWSDVVGRRCSL
                     LVCILLSALGYLLLGMSTNVFLFTLARVPVGVFKHTLSISRALLSDLVTEKERPLVLG
                     QFNTASGVGFILGPVIGGYLTELDGGFYVTAFMCCSVFLLNAGLVWLLPWRETSLNIP
                     DSGWSLDQKHATVTIKSESTLQGAATTPEARRSGRNLRPPWVEVMSTLKDMKNLIFSA
                     LWDVFLVRLLMGVAVMLYYSNFVLALEERFGVRPKTTGYLISYTSALGTLAGFAVGPI
                     LRLYKHNSHMVLLHSSALTCLLLLLYSTTNSMAMVVLSSTLLSFSTTIGRTCITDLQL
                     SVGGAQASGTVIGVGQSVTAVGRILAPLLSGLAQEISPCGPPSLGAALALVAILIMTL
                     YRPPFSGDGSERLKRE"
     exon            195..282
                     /gene="Mfsd9"
                     /gene_synonym="RGD1562212"
                     /inference="alignment:Splign:2.1.0"
     exon            283..326
                     /gene="Mfsd9"
                     /gene_synonym="RGD1562212"
                     /inference="alignment:Splign:2.1.0"
     exon            327..456
                     /gene="Mfsd9"
                     /gene_synonym="RGD1562212"
                     /inference="alignment:Splign:2.1.0"
     exon            457..666
                     /gene="Mfsd9"
                     /gene_synonym="RGD1562212"
                     /inference="alignment:Splign:2.1.0"
     exon            667..3139
                     /gene="Mfsd9"
                     /gene_synonym="RGD1562212"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgcggtggg ggcgtggtct gcagcggcta ggctgtccgc acccccagcc ctcaggggaa
       61 tggcgctggg ggtccggggg cgcggggcct cggggcagga tctaacttca gagaccccgg
      121 tgacggccac agcatcgtcc agtgctgtga gctcccgccg cttcctgctc tggctctacc
      181 tggtaggctt cttggatctg tttggtgtca gcatgactgt cccattgttg aatcttcatg
      241 tcagatccct tggagtaagt cccgtcgttg ctggaatagt aggctcctcc tatggcattt
      301 tgcaactctt ctccagcacc tttgtgggct gctggagtga tgtggttgga agacggtgct
      361 ccttgctggt gtgcattttg ctcagtgccc tgggctacct cctccttgga atgtccacca
      421 acgtgttcct gtttacgctg gctagagtcc ctgtaggtgt ttttaaacac acactctcca
      481 tctctagagc actgctttct gacctggtca cagagaagga gaggccactt gtgctgggac
      541 agttcaacac agcctcaggc gtgggcttca tcttgggccc agtgattggt gggtatctga
      601 ctgaactgga tggtggattc tacgtgacag ccttcatgtg ctgctctgtc ttcctcctca
      661 atgctggtct agtctggctg ttaccttgga gagaaacaag cctcaacatc ccagacagtg
      721 gttggagctt ggatcagaag catgctacag tgaccataaa gtcagaaagt acacttcagg
      781 gagcagccac cacccctgag gccaggagga gtgggaggaa cctgcggccg ccctgggttg
      841 aggtcatgtc gaccttgaag gacatgaaga acctgatctt ctctgcactg tgggatgtct
      901 tcctcgtgcg cttgctgatg ggggtggccg tcatgctgta ctacagtaac tttgtcctgg
      961 ccctggagga gcgttttggg gtacggccca agaccacagg gtacctcatc agctacacca
     1021 gtgccctggg taccctggct ggctttgctg tggggcccat tctacggcta tacaagcaca
     1081 actcacacat ggtcctcctg cactccagcg cactcacctg cctgctgctg ctgctctact
     1141 ctacgaccaa ctccatggcc atggtggtct tgtcctccac tcttctgtcc ttctccacca
     1201 ccattgggag aacctgcatc acagacctcc agctgagtgt gggcggagcc caggccagcg
     1261 gcaccgtcat aggtgtgggc cagtctgtga ctgcggtggg ccgtatcctt gccccactgc
     1321 tctctggact ggcccaggag atcagtccct gtggccctcc aagcctgggt gctgctttag
     1381 ctctggtagc tattttaatc atgactctat acagacctcc cttcagtggg gatgggagcg
     1441 agagactcaa acgggagtag gattgggacc acttggagaa gcagatttag aaccaggcaa
     1501 ctaagggaca aagatgggca tttcagagat agtgggtggc ccaagtgcag ttattcccag
     1561 atggctgtgc ccggtcttca cctgcacaga agtcagctgc agataggaaa gttcagactg
     1621 agcccagccc tgtcaggggc gaccatgtca gaagcttacc tgaaaggctt ttcttcctac
     1681 ctgggcacag taaagttaac attgcttctg ggaaaacgca gcatgctacg agaggtggga
     1741 gagtgacttg aaatgtggag ggaagcctca gtgttaatca tggactggac atctgtctgg
     1801 attgtagttc cctgtaatcg atgcagctgc tttatttaaa ccagcctgtt gctttctcag
     1861 ttggtaacat cagatgctga gtccttaccc ccagacattt agatacacgg gcctcactga
     1921 ggtcagacct atgggctttt aaggcccagt ggccattttt cacggactgg ggaggaacac
     1981 tgagacatga aggttttgat taaagtaaaa attggagacc gcagtgtttt taatagttaa
     2041 ctactaaacc tactgatcgc aactggggca catcaccttt cccacttctc gggaatcaga
     2101 ctgcaccagg cacaagcaac tttcagggct gccctctctt ctctttgaga ctcagtcact
     2161 ttggactccg gacccccctt ccccaccaga gtcccaactt ctgggaccca agatccacat
     2221 tccgtataat cttcttgact attcctctag tgtgtgatgc ccattttcaa cctaacacat
     2281 gtagttgtga gtggttcttc aacgcactaa ttattcataa ctctaatgtt tattatttat
     2341 aaatcagaaa aaaaatgagg ggtttgcata gttttaggca ttgtatgtgg gataaactca
     2401 aatatttttg actgttggaa gtatatttta gcttgaaagc catccccttt cctctctggc
     2461 tgcgggaaaa ccaattcact tttaagctgt ttccactgtg aattttaaca caggcacaaa
     2521 gaactcttga gggaccaaag tgtggggcag atggccatgt cctcacgcag catctgaatg
     2581 tcatggagat gggactcaga gggacaatga ttaaactgat ggtatggcat aatgaagtaa
     2641 gatttcagaa gtgtttctcc tcaaagacag tggacttttc ttacaaatgc ttatggaagc
     2701 catgttttta ttcttgaaac cacatcactt tattttttaa gtgaaacgaa cttagtgagt
     2761 ctttaaaatt aataagacac atggagatac tgaaaaccca aatcaaccag tatctggaga
     2821 aacgcttgtt accctgtatt agtgactttg ggagttgtta atgactttgg tgggttttct
     2881 gttctgtctt cttagttggt aaacggttgc tcacgtttca tcttgtctgg tgtcttgttc
     2941 aaagtgtggt ccatagacca ccgtgtcctg ggatactcgc atgctccagc cccagcatat
     3001 tcctgctagg ggccactctg agaaggagcc atgtagctga tttgtttaca cagaaaactt
     3061 tggtgaccac tggtctggtg agtggagttt atatcatttt atcaggctaa aatctcaggg
     3121 aaattaaatc tgttcagtt
//
