LOCUS       NM_001106911            4840 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus major facilitator superfamily domain containing 6
            (Mfsd6), mRNA.
ACCESSION   NM_001106911 XM_001063359 XM_237146
VERSION     NM_001106911.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4840)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 4840)
  AUTHORS   Tashiro-Yamaji,J., Kubota,T. and Yoshida,R.
  TITLE     Macrophage MHC receptor 2: a novel receptor on allograft
            (H-2D(d)K(d))-induced macrophage (H-2D(b)K(b)) recognizing an MHC
            class I molecule, H-2K(d), in mice
  JOURNAL   Gene 384, 1-8 (2006)
   PUBMED   17010536
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            [WARNING] On Jul 30, 2024 this sequence was replaced by
            NM_001106911.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_237146.3, XM_001063359.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643286.28188.1,
                                           SRR26643284.12272.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-226               JAXUCZ010000009.1  56265152-56265377
            227-406             JAXUCZ010000009.1  56265402-56265581
            407-1998            JAXUCZ010000009.1  56285257-56286848
            1999-2096           JAXUCZ010000009.1  56316431-56316528
            2097-2258           JAXUCZ010000009.1  56343497-56343658
            2259-2357           JAXUCZ010000009.1  56344475-56344573
            2358-2638           JAXUCZ010000009.1  56345744-56346024
            2639-4840           JAXUCZ010000009.1  56348245-56350446
FEATURES             Location/Qualifiers
     source          1..4840
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q22"
     gene            1..4840
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /note="major facilitator superfamily domain containing 6"
                     /db_xref="GeneID:301388"
                     /db_xref="RGD:1562317"
     exon            1..406
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /inference="alignment:Splign:2.1.0"
     exon            407..1998
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /inference="alignment:Splign:2.1.0"
     CDS             458..2842
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /codon_start=1
                     /product="major facilitator superfamily domain-containing
                     protein 6"
                     /protein_id="NP_001100381.1"
                     /db_xref="GeneID:301388"
                     /db_xref="RGD:1562317"
                     /translation="MAADDKVAILTDDEEEQKRKYVLADPFNGICRESEPPSNETPSS
                     TETSAIPEEEIDWIEKHCVKINNDLLISKVFYFFFYSAYGSLYPLLPVYYKQLGMSPS
                     QSGLLVGIRYFIEFCSAPFWGVVADRFKKGKIVLLFSLLCWVLFNLGIGFVKPATLRC
                     IPKIPPTAHPTNVSHPVTILPMNSSTVAFFTTPPKSLEKRSLLFSATEPNISNIDLLS
                     TALTLTTEPTLRPQTEGITHHVTDLILNTSTVTLPPTGNVTRETTIAVVTTTKSLPSD
                     QVTLVYDQQEVEAIFLVILVVVIIGEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWG
                     SLGWGLAMLSVGIGIDYTHIDVLIDGKGCKPPEYRNYQIVFIVFGVLMTMALIVATQF
                     RFRYNHFNNSDGKGKEMEIPQVERDNSTESSEETPTAATHSQAFNFWDLIKLLCSVQY
                     GSVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIE
                     LIGHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVP
                     PELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYFGAAATFRGIGMACLVILLLFALIQ
                     WLAVPDEEEDKTMLAERIPVPSSPVPIATIDLVQQQTEDVMPHIEARLPPKKTKHQEE
                     QEDVNKPAWGVSSSPWVTFVYALYQVKELMRLTRDSRASEIQPLQGIHENRQVSPAGG
                     AQCAPHETHSDSPRNQLSPDTAASQMQSSPAHPSATPHGQESGQQQTQPTVGEH"
     exon            1999..2096
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /inference="alignment:Splign:2.1.0"
     exon            2097..2258
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /inference="alignment:Splign:2.1.0"
     exon            2259..2357
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /inference="alignment:Splign:2.1.0"
     exon            2358..2638
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /inference="alignment:Splign:2.1.0"
     exon            2639..4840
                     /gene="Mfsd6"
                     /gene_synonym="RGD1562317"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggatttgcc actccagccc ggctggatcc cgggtccccc ggggcggccc cagagggcgg
       61 gaggccggga ggaggcggcg gacgcatccg ccgccgcagg aggcggagcg ctgcacctgg
      121 cgcccggtcc tccagctcag ccctgaaacg ggtccagccg gtccggagcg agggaggcgg
      181 cgaagccagg cctgggacta aagcggtgag gaggtgagaa ccgaagtcgc tcgccccacc
      241 cgacctgcat ccagccgccg cgcccgccgc aaccccagga gaggagcaag cgacccaacc
      301 gacatgcagc gttctgaccc gcccgccgcc gccccggcgc cccgagcagc cgctccgcac
      361 cccggggaca gggctcctcg cgctccccgc agctgagcgc cgctagatca ccactcagga
      421 ttttgaaggt cactgacccg gatggtggtg gtaagccatg gctgctgatg ataaagttgc
      481 tatcctaact gacgatgaag aggagcagaa gagaaaatat gtgcttgctg atcctttcaa
      541 cggcatctgc agggaatcag agccaccttc taacgaaacc ccctcctcca cagagacttc
      601 cgccattccc gaggaggaaa tagactggat agagaaacat tgtgtgaaaa tcaacaatga
      661 tcttctcatc tccaaggtgt tttatttctt cttttactcc gcctacggct ctctttaccc
      721 tctcctgccc gtgtattata agcagctggg aatgtcgcca agccagagtg gactgctggt
      781 gggcattcgg tacttcattg agttttgcag cgctcccttc tggggtgtag ttgcagatcg
      841 tttcaaaaag ggcaaaattg tcctcctctt ttcgcttttg tgttgggttt tgtttaacct
      901 gggcattgga ttcgtcaaac ctgctacctt gagatgtata ccaaagatcc ccccaacagc
      961 tcaccccacc aatgtaagtc acccagtaac catcctgcca atgaactcct ccactgtcgc
     1021 tttctttacc acaccaccaa aatcactcga gaaaaggagc ctgctgttct ctgcaacaga
     1081 gcccaatatc tcaaacatag atctcttgtc aacagcattg accttgacca ccgaacccac
     1141 actacggccc cagacagagg gaattaccca ccacgttaca gacttgattt tgaacacaag
     1201 cacagtgact ctgcccccca caggaaatgt caccagggag acaaccattg ctgtggtcac
     1261 caccaccaaa tctttaccgt ctgatcaagt cacccttgtg tatgaccaac aggaagttga
     1321 ggcaatattc ttggtcatct tggtagttgt cataatagga gaatttttca gtgcctcttc
     1381 tgtcacgatc gtagacacag taaccctcca gtacctggga aaacaccgag atcgctatgg
     1441 gctccagcgc atgtggggct ccctgggctg gggcctggcc atgctgtctg tgggcattgg
     1501 gattgactac actcatatag atgttctcat tgatgggaag gggtgtaagc cccccgaata
     1561 ccgaaactac cagatcgtct tcatcgtctt tggagttctc atgaccatgg ccctgatcgt
     1621 tgccactcag ttccggttcc gctacaacca cttcaacaat agtgatggca aagggaaaga
     1681 gatggagatc ccacaggtgg aaagggacaa ctccacagag tcttccgaag agactccaac
     1741 tgctgccact cactcgcagg ctttcaactt ctgggacttg atcaagctgc tgtgtagtgt
     1801 gcagtatggc tcggtgctgt ttgtggcctg gttcatgggt tttggctacg gctttgtgtt
     1861 cacctttctc tactggcatc tggaagatct aaatggaact actacccttt ttggggtctg
     1921 ttcagtcctg agtcacgtgt ccgagttgac tgcttacttc ttcagccaca agcttattga
     1981 gttgattggc cacatcaggg ttttgtacat tggcctggcc tgtaatacag ctcgctacat
     2041 ttacatttcc tacctggaaa atgcctggac tgtcctccct atggaagttc ttcaaggcgt
     2101 cacgcacgca gccatctggg cagcgtgcat ctcttacctc agtgctgctg tcccccctga
     2161 gctgaggact tctgcacaag gaatcctgca aggccttcat ctgggtctgg ggagaggatg
     2221 tggtgccatg atcggaggcg tgttggtcaa ttattttggg gctgctgcaa ccttccgagg
     2281 gattggcatg gcttgcctgg tgatcctcct gctcttcgcc ctgatccagt ggctggcagt
     2341 gcctgatgag gaagaagata agacgatgtt ggcagaaagg attcctgttc cctctagtcc
     2401 tgttcccata gcaactatcg acctggtaca gcaacagaca gaagatgtca tgccacacat
     2461 tgaggccaga cttccgccca aaaaaaccaa gcaccaggaa gagcaggaag atgtgaacaa
     2521 acctgcctgg ggggtcagct cttctccttg ggtaaccttt gtctatgcgc tctaccaagt
     2581 taaagagctg atgcgactga caagagacag ccgcgcttct gagatacaac ctttacaggg
     2641 gatccatgag aatcggcaag tctctccagc tggtggagcc caatgtgctc cacatgaaac
     2701 tcactccgac tcacctagaa accagctatc ccctgacaca gcagcatctc aaatgcagtc
     2761 cagccctgct caccctagtg ccaccccaca tggacaggag agtggacaac agcagactca
     2821 gccaactgtg ggagaacact gagggctccc ggtcatctca taccctgcat ggcaccaggc
     2881 acctcagcca ggatagaggg cgagacccca accctgacca tgcctctgca aggggaacac
     2941 tgtaacgcac atgcttctaa atatctacat tcattactgc ggaaccacac acacacacac
     3001 acacacgcac acacacaacc ttgcaagtgt gcctgcacat gtgagctgta gtatgtgtcg
     3061 aaggaaaacg gaaacctcca caggcctgca gagacataga acaatgttga gaaggagccc
     3121 ccgctcttgg ttagttgggt ctgacctaac ttcttgggca aggtgaaagg gtgagaagca
     3181 gaactcacac caagttgggt gaatgaaagg gcctcaaggt aaacagggac ttcctcccca
     3241 tcttctgatt atttattctg aatattgggt tcttagtgaa aagcgagaag aaaaaagtat
     3301 atctatagtt ttgtcttgaa gaaaaagcat tttaaaaatt ataagacgca ttgaaaaggg
     3361 agccggatgg aagttagtag aatgtacgct ttgtgttgtt gttgtttaga aaagttcaaa
     3421 gtttcactga gctttgcaca tctctagcaa atatattttt atatgcatat agtatatggt
     3481 gagcatagtt ctttgggaag catagctgtt atggactact gcatattgag ttgagcttta
     3541 aaatgtcttt gttgcaatgg gctggcagaa tgagcagaag tgagagaata tttcaaagaa
     3601 tccaaccaac tcagtatcct gagacttgac agacaaggct ttactaagca gctccttagc
     3661 aacctctgca gctatatttt acagtgactt gggttctaat tagctaaggg ggaaaaaaag
     3721 acctactcat cggattccta agcgttaagc taaagagtac tatttacaaa gagcaggatg
     3781 agatttaagt gcctggggga gggacatgat gtttaaaaat tatatagcag gtctgttttg
     3841 attgtgaagg agtaaatagg aagccaggaa tgggaattct gagaataaga atgactttct
     3901 aaagacttaa gaaatgaatc ttagcacatt ctccttggaa ccgtagtcat acactgaaaa
     3961 cctgcgggtt tgggctacaa ctacaccagt taacaccaca gacataggag gtctgggtga
     4021 ttgcatgtag agcttgctcc tagaaggaaa gcagaggctg taagaagcct ggggattcct
     4081 gtggatgcta ctgtggctga actagggtca gtcatactgt gggtgaacat tgagggtgaa
     4141 cacaagaatg gttcaaaacg gaaggtcacc cttgcctctg acgtaggaga caggatcagc
     4201 tgtacagtgc gacagtgctg cctgtctctg catgtggagg aatcgttcta catctggatg
     4261 tctagcttca ccacaaaaca cagcttagaa cgatgggaac agttgcgcaa atggttactt
     4321 ttgcacttga acggtactgt actgtcaatc ctcatgtctc attttaagtg acctttaaaa
     4381 tcagatgtat ttattatgct cgtgtaatta cagaaacgaa gtgggagaca gactgagccc
     4441 cacctatgaa tgtacagtat gtggattgcg aaacctgagt gttgggagtc agaaccttgt
     4501 atcttatgtt tacaatcctg gttgatttct ttgagaagct gctggttttg gagatgccca
     4561 gtgaacgtgt tgaaataaaa agtgaatacc atttttaaaa tatttcttaa gtgaaaaaca
     4621 cgtgaccaaa taagagaaac accctctgct ctgtaatgaa tgacactaaa ttcaacatgc
     4681 cttcgttaca aaacgtttac tgtgagcgtc gatccaacag tgcagtgact tctagccttt
     4741 tgagctgaca ccttcacgag tttgtggact ttgtgacttt ttccttcctg tccttacagt
     4801 gccatatgtc acttaaaaat tattaaagtg aattccaatt
//
