LOCUS       XM_001078789            2083 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus major facilitator superfamily domain
            containing 13B (Mfsd13b), transcript variant X1, mRNA.
ACCESSION   XM_001078789
VERSION     XM_001078789.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001078789.6.
            
            On Jan 21, 2021 this sequence version replaced XM_001078789.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2083
                     /gene="Mfsd13b"
                     /note="major facilitator superfamily domain containing
                     13B; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 96% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:691551"
                     /db_xref="RGD:1582763"
     CDS             286..1830
                     /gene="Mfsd13b"
                     /codon_start=1
                     /product="transmembrane protein 180 isoform X1"
                     /protein_id="XP_001078789.3"
                     /db_xref="GeneID:691551"
                     /db_xref="RGD:1582763"
                     /translation="MSEPLASQEHGRELLKGNHQPHLILGVWGWPVKAASPEKSYHSF
                     KSIEFLKGTKISAWKMTLLNIKSEAWAYSLITLGTEMLSSFFSFYYMKLFLEVYKISE
                     LAFYQSQVILMIWNILTDLSGYFHMSSQNDCCLSYRCSLLGALLHAVAFLLPWFPWKH
                     YRESDWLTGLQLVVSLCAFDSTHTWVQQAQCRLFAETSPRHESRLQLTRINQVASLVG
                     STSILFCGLISHNMEILPNFQAIAVLIAFLALISFYSGMFHMRRFEFQRIPEENFLSE
                     SEQELAGTSVILLMRQILPQRNLYLFLIMNFFQVFHLTFFSNFMMIFVDNLIPNKALS
                     SSVRSIMYGAGFICPQCLVLLGQSWLKTYGYYKVILLSFCLEGAAALVMLLLGQEHYF
                     CLAVYLTVIMVIVHTSFCLFNLPVADMVDADLLKCKRQSSLSLMVSVINALFTRSAQS
                     LAPILILSKLSQHGYRELTSRTLLDLQDSMFGLVCVISLGIATVQILTWSSFSISKRR
                     DCPGMV"
ORIGIN      
        1 aggcggggag gcgaagaggg tgcggtcggc agctcctcct cttttgtctg cgtcgcgtct
       61 cctcagttga gtgcactcca gttccggagt gtggaggagg tttcaagccg atccagtgtg
      121 ccgaggacta cggattctgg gcaccgggca tcctcttccc acacgagggt ttcagatgcg
      181 ggtcaactct tctccgccct gtcctcggtg gtgcgcggag ggagactcag ggtccgttgc
      241 gaggttaaag gcgagagaac gctactgaga gaaagctgct cctcaatgtc ggagcccttg
      301 gcctcccagg agcatggacg tgaactccta aagggcaatc accagcccca cctcatactt
      361 ggagtctggg gctggccagt caaagccgcc tcccctgaga aaagttacca cagttttaaa
      421 agcatagaat ttcttaaagg cacaaaaatt tctgcatgga aaatgacact tttaaatatt
      481 aaatctgaag cctgggcata ctctctgatt acactaggaa ctgaaatgtt aagttctttc
      541 ttcagtttct actatatgaa acttttctta gaagtataca agatttcaga gctggccttc
      601 tatcagtccc aggtaatttt aatgatctgg aatattctga ctgacctgag tgggtatttc
      661 cacatgagtt ctcagaatga ctgctgtctc agttaccgtt gctccctgct tggagccctt
      721 ctgcatgccg tggccttctt gctcccttgg ttcccttgga aacactatag agaaagtgac
      781 tggcttaccg gactccagct ggtagtttcc ctgtgtgcat ttgacagcac ccacacctgg
      841 gtacagcaag cccagtgtcg cctgtttgca gagacttccc ccaggcacga gagcaggctg
      901 cagctgacca gaattaacca ggtggcatcc ctggtgggct ccaccagcat ccttttctgt
      961 ggcctcatct ctcacaacat ggaaatcctg cccaattttc aagccattgc tgtcctcatt
     1021 gccttcctgg ctttgattag cttttacagt ggcatgttcc atatgagacg gtttgaattt
     1081 caaagaatcc cagaggaaaa tttcctctca gagagtgaac aggagttggc agggacctct
     1141 gtcatcttac tgatgagaca aatcttgcct cagaggaacc tctacctttt cctcatcatg
     1201 aatttcttcc aagtcttcca tttgaccttc ttcagtaact tcatgatgat ctttgtagac
     1261 aacctcattc ccaacaaggc cctctcttct tccgtaagga gcatcatgta tggggctggc
     1321 tttatctgtc ctcagtgcct ggtacttcta ggtcagtcct ggctgaagac atacggttac
     1381 tataaggtta ttttactttc tttctgccta gaaggggcag ccgcccttgt catgctactt
     1441 ctgggacagg aacactattt ctgcttggct gtttacctca ctgttatcat ggtgattgta
     1501 cacacctcgt tttgcttatt taatttgcca gtggctgaca tggtcgatgc agatttactg
     1561 aagtgtaaga ggcagtcttc tctttccttg atggtttctg tcatcaatgc tttattcacc
     1621 agatctgccc agtctttagc ccccatattg atactgtcta agctcagcca gcatgggtac
     1681 agagagctga ccagcagaac acttttagat ctccaggaca gcatgtttgg tttggtttgt
     1741 gtcatttccc tgggcatcgc aacagtgcag attctgactt ggagctcctt ctccatcagc
     1801 aagagaagag actgcccagg gatggtgtaa gcacagtacc tgtgccaccg cgtcacgtgc
     1861 ttgtcgattc tcacaggcta tgctgcactc aaagcagaaa tgatctttat tccctctcat
     1921 ttaaaatcca gagcaaataa agcaaagcta acagcgtgtt ttgggtgttt tttgttttgt
     1981 tttttttttt tttttgtttt tgacttttta gttaaagcct ttcccaagga actttttcct
     2041 gatgttcttg cagcctagga cctgtaactc ttcactgtta gac
//
