LOCUS       NM_001108730            1831 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus major facilitator superfamily domain containing
            12 (Mfsd12), mRNA.
ACCESSION   NM_001108730 XM_001075648
VERSION     NM_001108730.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Crawford,N.G., Kelly,D.E., Hansen,M.E.B., Beltrame,M.H., Fan,S.,
            Bowman,S.L., Jewett,E., Ranciaro,A., Thompson,S., Lo,Y.,
            Pfeifer,S.P., Jensen,J.D., Campbell,M.C., Beggs,W., Hormozdiari,F.,
            Mpoloka,S.W., Mokone,G.G., Nyambo,T., Meskel,D.W., Belay,G.,
            Haut,J., Rothschild,H., Zon,L., Zhou,Y., Kovacs,M.A., Xu,M.,
            Zhang,T., Bishop,K., Sinclair,J., Rivas,C., Elliot,E., Choi,J.,
            Li,S.A., Hicks,B., Burgess,S., Abnet,C., Watkins-Chow,D.E.,
            Oceana,E., Song,Y.S., Eskin,E., Brown,K.M., Marks,M.S.,
            Loftus,S.K., Pavan,W.J., Yeager,M., Chanock,S. and Tishkoff,S.A.
  CONSRTM   NISC Comparative Sequencing Program
  TITLE     Loci associated with skin pigmentation identified in African
            populations
  JOURNAL   Science 358 (6365) (2017)
   PUBMED   29025994
  REMARK    Erratum:[Science. 2020 Jan 17;367(6475):. PMID: 31949055]
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Schroder,B., Wrocklage,C., Pan,C., Jager,R., Kosters,B.,
            Schafer,H., Elsasser,H.P., Mann,M. and Hasilik,A.
  TITLE     Integral and associated lysosomal membrane proteins
  JOURNAL   Traffic 8 (12), 1676-1686 (2007)
   PUBMED   17897319
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474029.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001075648.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..1831
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /note="major facilitator superfamily domain containing 12"
                     /db_xref="GeneID:362824"
                     /db_xref="RGD:1307722"
     exon            1..317
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..1459
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /codon_start=1
                     /product="major facilitator superfamily domain-containing
                     protein 12"
                     /protein_id="NP_001102200.1"
                     /db_xref="GeneID:362824"
                     /db_xref="RGD:1307722"
                     /translation="MSPPSGDAGPGPPRSLSLAARLSFAVGHFLNDLCAGMWFTYLLL
                     FLHSVRGYSSRGAGLLLLLGQVADGLCTPLVGYEADRAACVRCGPRKAWHLAGTVCVL
                     LSFPFIFSPCLGCGEATPEWAALLYYGPFIVIFQFGWAATQIAHLSLIPELTTSDHEK
                     VELTALRYAFTVVANITVYGAAWLLLHLQGSAHGGQNISVGDQLGVQDVSVFRNLALL
                     VVGVGAVFSLLFHLGTKESRRPQHQGIEPDEHSPLVAPVPQSLLLWKHWLQEPAFYQV
                     GLLYMTTRLIVNLSQTYIAMYLTYSLSLPKKFIATIPLVMYLSGFFSSFLMKPINRRI
                     GRNMTYFTGLLVILAFAAWVALADNLGVAVYGAALLLGAGCATILVTSLAMTADLIGP
                     HTHSGAFVYGAMSFSDKVANGLAVMAVQSLHPCPSELCCGACIGFYHWVMTAVTGGVG
                     VAAALALCSILIWPIRIRTRDPRDRP"
     exon            318..528
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     exon            529..667
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     exon            668..853
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     exon            854..946
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     exon            947..1039
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     exon            1040..1210
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     exon            1211..1305
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     exon            1306..1436
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
     exon            1437..1831
                     /gene="Mfsd12"
                     /gene_synonym="RGD1307722"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgcggtgag gtacgatctg cggccgcgat gtcgcctccg tcgggcgacg caggcccggg
       61 gccgccgcgg tcgctgtccc ttgccgcgcg tctgagcttc gcggtcggcc acttcctcaa
      121 cgacctgtgc gccggcatgt ggttcaccta cctgctgctg ttcctgcact ccgtgcgcgg
      181 gtacagctcg cgcggcgcgg gactgctgct gctgctcggc caggtggccg acgggctctg
      241 cacgccgctc gtgggctacg aggccgaccg tgccgcctgc gtacgctgcg gaccccgcaa
      301 ggcctggcac ctagcgggca ctgtctgtgt cctgctctcc ttcccattca tcttcagccc
      361 atgcctgggc tgtggggaag ccacacctga gtgggctgcg ctgctgtact atgggccctt
      421 catcgtcatc ttccagtttg gctgggctgc cacgcagatt gcccacctga gcctcatccc
      481 agagctgacc accagtgacc acgagaaggt ggagctcaca gccctcaggt atgccttcac
      541 tgtggtcgcc aacatcactg tgtatggagc ggcctggttg ctgctgcatt tgcagggctc
      601 tgcgcacggg ggccagaaca tcagtgtggg tgaccagctg ggagtccagg atgtgtctgt
      661 gttccggaac ctggccctgc tggtggtggg tgtgggggcc gtcttctcgc tgctcttcca
      721 cttgggtacc aaggagagcc gcaggcccca gcaccagggg atcgaacccg atgagcacag
      781 ccccctggtg gcccccgtgc cccagtcact gctgttgtgg aaacattggc ttcaggagcc
      841 agctttctat caggtaggcc tgctgtacat gaccacaagg cttattgtga acctgtctca
      901 gacctacatt gccatgtatc tgacctattc tctcagcctg cccaagaagt tcattgccac
      961 catccccctg gtgatgtact tgagtggctt cttctcctcc ttcctcatga agccaatcaa
     1021 caggcgcata gggagaaaca tgacctactt caccgggctg ctggtgatcc tggcctttgc
     1081 agcttgggtg gccctggcag ataacctggg tgtggccgta tatggggccg cattgctgtt
     1141 gggtgcaggc tgtgccacca tccttgtcac ctccctagcc atgaccgctg acctcattgg
     1201 cccccatacg cacagtggag ccttcgtgta tggtgctatg agcttttcgg ataaagtggc
     1261 caatgggctg gcagtcatgg ctgtgcagag cctgcatccc tgtccctctg agctgtgttg
     1321 cggagcctgc atcggctttt accactgggt gatgacagca gtgacgggag gcgtgggtgt
     1381 ggccgcagcc ctggctctct gcagcatcct catctggccc attcgcattc gcacccggga
     1441 ccccagagac cggccctgac ttctggctct ccagggtgac atggtgaagg accaaacaga
     1501 catcctgacc tccgatcccc caacccgctc ggggtcaaag ggcccggcat gcaggtgggg
     1561 ggtaccagcc aagcttgctg agccctaaga gcccgtgggt gcccgaccct actattgaca
     1621 aggatgcacc cgccctcggg gaggctgctg gggacacatg cttgggctgc acgtgggaga
     1681 gatcgcccgg cttacaggga cacggacaca tgaatcagta acacggcttt atcagagcgt
     1741 gggggtgaag accgggggtg gctggccagt ggccgggtag ggacggtcca ggccccgctg
     1801 tttgaagtcc tgtgcagtga agcgcggccg a
//
