LOCUS       NM_001191847            2173 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus major facilitator superfamily domain containing 1
            (Mfsd1), mRNA.
ACCESSION   NM_001191847 XM_342258
VERSION     NM_001191847.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 17, 2010 this sequence version replaced XM_342258.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ217493.1, FQ211604.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-186               JAXUCZ010000002.1  154156204-154156389
            187-239             JAXUCZ010000002.1  154158237-154158289
            240-352             JAXUCZ010000002.1  154159195-154159307
            353-395             JAXUCZ010000002.1  154160923-154160965
            396-463             JAXUCZ010000002.1  154161562-154161629
            464-572             JAXUCZ010000002.1  154163043-154163151
            573-675             JAXUCZ010000002.1  154165880-154165982
            676-774             JAXUCZ010000002.1  154167505-154167603
            775-886             JAXUCZ010000002.1  154167994-154168105
            887-943             JAXUCZ010000002.1  154168764-154168820
            944-1100            JAXUCZ010000002.1  154169137-154169293
            1101-1198           JAXUCZ010000002.1  154170597-154170694
            1199-1311           JAXUCZ010000002.1  154172470-154172582
            1312-1359           JAXUCZ010000002.1  154173120-154173167
            1360-1417           JAXUCZ010000002.1  154173853-154173910
            1418-2173           JAXUCZ010000002.1  154175454-154176209
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q32"
     gene            1..2173
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /note="major facilitator superfamily domain containing 1"
                     /db_xref="GeneID:361957"
                     /db_xref="RGD:1305751"
     exon            1..186
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..1421
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /codon_start=1
                     /product="major facilitator superfamily domain-containing
                     protein 1"
                     /protein_id="NP_001178776.1"
                     /db_xref="GeneID:361957"
                     /db_xref="RGD:1305751"
                     /translation="MEEEDGEERALLGGRPEADSALQGAPRALPALCDPSHLAHRLVV
                     LLLMCLLGFGSYFCYDNPGALQTQVKRDMQVNTTKFMLLYAWYSWPNVILCFLGGFLI
                     DRIFGIRWGTVIFSCFVCIGQVIFALGGIFNAFWLMELGRFVFGIGGESLAVAQNTYA
                     VSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYGKIEASLGSAGHTTLGVTLMVGG
                     ITCILSLICALVLAYLDRRAEKILNKEQGKTGEVIKLTDIKDFSLPLMLVFIICVCYY
                     VAVFPFIGLGKVFFIEKFRFSSQSASAINSIVYIISAPMSPIFGFLVDKTGKNIVWVL
                     CAVATTLVAHMMLAFTFWNPWIAMCLLGFSYSLLACALWPMVAFIVPEHQLGTAYGFM
                     QSIQNLGLAVIAILAGMILDTRGYLLLEVFFIACVSLSLLAVVFLYLVNRARGGNLNY
                     SAKQREQMKPSHSE"
     exon            187..239
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            240..352
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            353..395
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            396..463
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            464..572
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            573..675
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            676..774
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            775..886
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            887..943
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            944..1100
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            1101..1198
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..1311
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            1312..1359
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            1360..1417
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
     exon            1418..2173
                     /gene="Mfsd1"
                     /gene_synonym="RGD1305751"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tctgcttcct gctccattcc ggaccgatgg aggaggaaga tggggaagaa cgggcgctgc
       61 ttgggggccg cccggaggcg gacagcgcac tccagggcgc ccctcgcgct ctgcccgcgc
      121 tctgcgaccc cagccacctg gcgcaccggc ttgtggtgct tttgctgatg tgcctccttg
      181 gcttcggcag ctatttctgc tacgacaacc ccggagccct ccagactcag gttaaacggg
      241 acatgcaagt gaataccacg aaattcatgc tgctgtacgc ctggtattct tggcccaatg
      301 taattttgtg tttcttgggt ggctttctga tagaccgcat atttggaata agatggggca
      361 cagttatttt tagctgcttt gtttgcatcg gacaggtcat ttttgctctg ggtggaatat
      421 ttaatgcatt ttggctgatg gagcttggga ggtttgtgtt tgggattggg ggagagtcct
      481 tagcggttgc ccagaataca tatgctgtga gctggtttaa aggcaaagaa ttaaacctgg
      541 tgtttggact tcaactcagc atggccagaa ttggaagcac ggtgaacatg aacctcatgg
      601 gctggttgta tgggaagatt gaagcatcac tgggctcggc tggccacacg accctgggcg
      661 tgacactgat ggttggaggt ataacgtgca ttctttcact aatctgtgct ttggtccttg
      721 cttatttgga tcggagggca gagaaaatac taaataaaga acaaggaaaa acaggtgaag
      781 tcattaagtt gacggatata aaggacttct ccttacccct gatgctggtc ttcatcatct
      841 gtgtctgcta ctacgtggcg gtgttccctt ttattgggct gggcaaagtc ttcttcatag
      901 agaaattcag attttcttcc cagtcagcaa gtgcaatcaa cagcattgtg tatatcatat
      961 cagctcctat gtccccaata tttggattct tggtggataa aactgggaag aacatcgtct
     1021 gggtcctgtg tgcggtagcc accaccctcg tggcccacat gatgctggcc ttcacctttt
     1081 ggaacccgtg gattgccatg tgtctgctgg ggttctccta ctcattgctg gcctgtgcat
     1141 tgtggccaat ggtggcattc atagttcccg aacaccagct gggaacagct tatggattca
     1201 tgcagtctat tcagaacctt gggctggccg tcattgccat cctcgctggc atgatactgg
     1261 acacgcgggg atacttgctt ttggaggtgt tcttcatcgc ctgtgtttct ttgtcactgt
     1321 tagctgtggt ctttctgtac ttggtgaacc gtgcccgagg tgggaatcta aattattctg
     1381 caaaacaaag ggaacaaatg aagccttctc attcagaatg aaactctgaa atggctgccg
     1441 tgagagagac agcattcgct gctgactgga aaccttcagg aaaatcactt agaaaaataa
     1501 catagtggag aatatattta tatttgatac atacctactt aaggttcacg cagaccgttt
     1561 tagcctttcg taaccgtgtg ttatggaagt gtttagtcaa cagtgaacag tttagggact
     1621 ctggaacatt ctggaaggac ctcgtcaggg tctgcatctt ctgttggggt gatttttagt
     1681 aagtgcatcc ttcagatgta gcctttcctt tgcatcatag catgaaaaag ggaaaacccc
     1741 caaagcataa gggtctgggg tagaagctgt tacgtacaca ataaagaacg gcgtcttaac
     1801 cgcactcact gtgtcctgga gaacagtacg caatccctcg gaacttccca tgaggaggtt
     1861 gtgtatgaat gtcacttgtg gctgctgagc agcaaacctg tggacgtttt cttttcttta
     1921 aggacaataa aagtgtcctt cagtttatgg tggctaccta tgtacatgga tacataaaac
     1981 caatgcagga ggttatattt gtaaaacatt gcagcactga cctcaagttt tctgtggaag
     2041 ataatctcta gaaatcaaag ctgcagcaaa ggaaatgtcc taggcacggt ctctttgagt
     2101 agttttatgg gtgtagggta catgtggtac acagcattgt atacttgaag ctttggcatc
     2161 aagggactgg aga
//
