LOCUS       XM_017592703             946 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus microfibril associated protein 5
            (Mfap5), transcript variant X1, mRNA.
ACCESSION   XM_017592703
VERSION     XM_017592703.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017592703.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017592703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..946
                     /gene="Mfap5"
                     /note="microfibril associated protein 5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 25 ESTs, 8 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 87 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362429"
                     /db_xref="RGD:1307919"
     CDS             249..749
                     /gene="Mfap5"
                     /codon_start=1
                     /product="microfibrillar-associated protein 5 isoform X1"
                     /protein_id="XP_017448192.1"
                     /db_xref="GeneID:362429"
                     /db_xref="RGD:1307919"
                     /translation="MLVFGQKALLLVVALSIPSDWLPLGVSGQRGDDVPETFTDDPNL
                     VNDPSTDDTVLADITPSTDDLASAGDKNTTAECRDEKFACTRLYSVHRPVRQCVHQAC
                     FTSLRRMYIINNEICSRLVCKEHEAMKDELCRQMAGLPPRRLRRSNYFRLPPCENMNL
                     QRPDGP"
ORIGIN      
        1 aacactgctt tctacgcctc tggcctggcc ccttctctct gtctctcttt tctctctctc
       61 cctccctcct tccttgctcc cccccacccc ccattgtttc agagtaggcc aaatgtgaag
      121 tctttccaag ggtgtggctg tgttcatctt attctccagc ccaagtggaa cagaggaaaa
      181 gccagagaag gacagacaca ctcggcagcc agaggccacg gcggacagag cacagcgctg
      241 tagacaatat gctggtcttt gggcagaagg ccttgctgct tgtcgtggca ctcagcatcc
      301 cctccgactg gctaccccta ggggtcagtg gccaacgagg agatgacgta cccgagacat
      361 tcacagatga ccctaatctg gtgaatgatc cttctacaga cgatacagtt ctggcggata
      421 tcacaccttc cacggatgac ctggcctcag ctggtgacaa aaatactact gcagagtgcc
      481 gggatgagaa gtttgcttgt acaagactgt actctgtcca tcggcccgtc agacagtgtg
      541 tgcaccaggc ctgcttcacc agtttacgtc gcatgtacat catcaataat gagatctgtt
      601 cccggcttgt ctgtaaagaa cacgaggcca tgaaagatga gctttgccgg cagatggcag
      661 gcctgcctcc aaggcgactc cgccgctcca actacttccg acttcctccc tgtgaaaata
      721 tgaacttaca gagacccgat ggtccgtgat caccaaggaa gaacgaagaa agtgtggatg
      781 agggaatccg aaattccttc tactccaacc gctgccatct gtcccgtaga cgtgtatttt
      841 taaactaagc cctttgcaat gtcccggctt cctaccctac tctgtaattt tcactggaac
      901 tggtaacgtt tgtctcgttt cgcaatacag tgtctccatt gttgta
//
