LOCUS       NM_001191626            3401 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus mex-3 RNA binding family member B (Mex3b), mRNA.
ACCESSION   NM_001191626 XM_218846
VERSION     NM_001191626.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3401)
  AUTHORS   Le Borgne,M., Chartier,N., Buchet-Poyau,K., Destaing,O.,
            Faurobert,E., Thibert,C., Rouault,J.P., Courchet,J., Negre,D.,
            Bouvard,D., Albiges-Rizo,C., Rousseaux,S., Khochbin,S.,
            Segretain,D., Crepieux,P., Guillou,F., Durand,P., Perrard,M.H. and
            Billaud,M.
  TITLE     The RNA-binding protein Mex3b regulates the spatial organization of
            the Rap1 pathway
  JOURNAL   Development 141 (10), 2096-2107 (2014)
   PUBMED   24803656
REFERENCE   2  (bases 1 to 3401)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jul 17, 2010 this sequence version replaced XM_218846.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.2462.1,
                                           SRR21887622.3778960.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-589               JAXUCZ010000001.1  146264319-146264907
            590-3401            JAXUCZ010000001.1  146265743-146268554
FEATURES             Location/Qualifiers
     source          1..3401
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q31"
     gene            1..3401
                     /gene="Mex3b"
                     /gene_synonym="Rkhd3"
                     /note="mex-3 RNA binding family member B"
                     /db_xref="GeneID:308790"
                     /db_xref="RGD:1306790"
     exon            1..589
                     /gene="Mex3b"
                     /gene_synonym="Rkhd3"
                     /inference="alignment:Splign:2.1.0"
     CDS             313..2043
                     /gene="Mex3b"
                     /gene_synonym="Rkhd3"
                     /note="ring finger and KH domain containing 3; mex3
                     homolog B"
                     /codon_start=1
                     /product="RNA-binding protein MEX3B"
                     /protein_id="NP_001178555.1"
                     /db_xref="GeneID:308790"
                     /db_xref="RGD:1306790"
                     /translation="MPSSLFADLERNGSGGGGGGGGGGGGSGSGGGETLDDQRALQLA
                     LDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAK
                     TNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPG
                     PPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMP
                     ENVDRAREEIEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPT
                     PSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSGSTAATSRLADYSPPSPALSF
                     AHNGNNNNNGNGYTYTAGEASVPSPDGGTELQPTFDPAPAPPPGTPLLWAQFERSPGG
                     GSAAPVSSSCSSSASSSASSSSVVFPGGGASSTPSNANLGLLVHRRLHPGTSCPRLSP
                     PLHMATGAGEHHLARRVRSDPGGGGLAYAAYANGLGTQLPGLPSSDTSGSSSSSSSSS
                     SSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHT
                     AVTQAIRIFS"
     exon            590..3401
                     /gene="Mex3b"
                     /gene_synonym="Rkhd3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctttgcgctc ggcattgtgg ccagccagcc gggcactcgg ggggcacgcg cggccgccgc
       61 tcgagctctg cccccacccc aaccgccagc agatctgggg tggggaccca ggcgggggct
      121 cttgcagcca ctgcccggtg cggactgcac gcagagaccc actcctccag gcgccgaaaa
      181 acgagccacg gagccctccg cagccgaccg gcctccccgc ccctgactac ccgcttcccg
      241 gctgcctttg tggctgcacc ttctagctgc cgagcagaga gccggctggg gcgcggcgcg
      301 cacggcggag cgatgcccag ctcgctgttt gcagacctgg agcgcaacgg cagcggcggc
      361 ggcgggggag gcggcggcgg gggaggcggc agtggcagcg gcgggggaga gactctggat
      421 gaccaaagag ccctgcagct tgcgctcgat cagctctccc tgttgggact ggacagtgat
      481 gagggcgcct ctctgtacga cagcgaaccg cgcaagaaga gcgtgaacat gaccgagtgc
      541 gtgccggtac ccagttccga acacgtcgcg gagatcgtag ggcggcaagg ttgtaaaatc
      601 aaagctttga gggcgaagac caacacttac atcaagaccc cagttcgcgg ggaggagcct
      661 gtctttgttg tgacgggcag gaaggaggat gtggctatgg ctcggaggga gatcatctct
      721 gccgcagagc acttctccat gatccgagcc tctcgtaaca agaacaccgc tctcaacggc
      781 gctgtgcccg ggccgcccaa tctgccggga cagaccacta tccaagtgag ggtgccatac
      841 cgcgtggtag ggctcgtggt ggggccaaag ggcgccacga tcaagcgcat tcaacagcag
      901 acacatacat atattgtgac acccagccga gacaaggagc cggttttcga ggtgaccggg
      961 atgccagaga acgtggatcg cgctagagag gagatcgaag ctcacatcgc gctgcgcacc
     1021 ggtggcatca tcgagctgac agatgagaac gacttccatg ccaatggcac agacgtgggc
     1081 tttgatctgc atcacgggtc cggcgggtcc gggccgggca gcctctggag caaacccacc
     1141 ccaagcatca ctcctacccc tggtcgcaag cccttctcca gctatcgcaa cgacagctcc
     1201 agctcgcttg gcagcgcatc cacagactct tacttcggag gtgggaccag cggcagcaca
     1261 gcggccactt cacgcctggc ggactacagc cctcccagcc ctgcactcag ctttgcccac
     1321 aatgggaaca acaacaacaa cggcaatggt tacacctaca cagcggggga agcctcagta
     1381 ccttccccgg atggaggtac tgagcttcag cctactttcg acccagctcc tgccccacca
     1441 cctgggacac cccttctctg ggcccagttc gagcgttcgc ctggaggtgg atctgcagca
     1501 ccagtatcct cttcctgctc ttcctcggca tcctcatctg cctcgtcgtc ctctgtggtc
     1561 tttcccgggg gtggcgccag cagcacaccc tctaatgcca atctggggct gctggtgcac
     1621 cgccgactac acccgggcac cagctgcccg cgcctgtctc cacccttgca catggccacg
     1681 ggggcgggag agcaccacct tgctcgccgc gtgcgcagcg acccaggcgg tggaggcctg
     1741 gcctacgccg cctatgctaa tgggctaggg acgcagctcc ctggcctgcc ctcgtcggac
     1801 acttcgggct cctcctcgtc ctctagctcc tcctccagct cttcctcctc ttcctccggg
     1861 ctgaggcgca aaggcagccg cgactgctct gtgtgcttcg agagcgaagt gatcgccgcg
     1921 ctggtgccct gtggccacaa cctcttctgc atggagtgtg ccaaccgcat ttgtgagaag
     1981 agcgagcccg agtgtcccgt ttgccacacg gcggtcactc aggccatccg catcttttcc
     2041 tgaaggcagt gcgcggcttg tgcactgcag ggaaggaggg tcacctccct agaccctcat
     2101 tccctagggc ctgcctgccc agacgcctct ggtgcccacc tctttccacc ccaccctcct
     2161 tactctcaga gatcctagag gagcttggaa agctgtagta tccgctcatt tttaaatgtc
     2221 atttttaaac aaaggaactt gccaggatct ctgcatcagg agtactgtag cctccgaacc
     2281 acctgaattg catgctctat aaataatagg aacggcgaca ttctagtaac gatagttttt
     2341 acactgtact taataggaag cttccaaaag aaaaccccac aagttttcca ttttcttgaa
     2401 gtagaaaaat gaacagtaat tatgaagatg attaattgtg ctatgggatg tatggactgt
     2461 tttgtgtgtt tccctttgtg ggtgggttcc tacagcgctc gttctagaac acaagtggat
     2521 cctttttgaa tgttcatgga agggccggga gttctgtaca gccaggaccc tgcagcttta
     2581 ttaaagttaa aactgtaaca tatctcttat atattaaaaa aaaaccttta aaagttttaa
     2641 agagaaattg cattaataca gattgaagta ttttattctt ttttgacttg aaaaattata
     2701 tttcatattg caaagatgtt tacaagtatt ttaatttaag ttcagtgaac tttttgtagc
     2761 tgggttaaat ctttttattt ttagtatggc cttatggcaa agaacactgt attattttaa
     2821 taatcacaca attgtgacgg actacaaacc ataaaatgta taacgttttg agcagtattc
     2881 tgttgggatg gagattttat aggttcagac aaatcttcta gatctacttc acccagcata
     2941 ttttctattc agtgatataa agcatatttt attctatatt attacaaaaa tggaaatgta
     3001 taaacatgtc aaaaggaaca gtcgatgctt tctaacattt gtataaatag aattcagtgc
     3061 aaattacagg aattctgttg cgccgctata gttttagtgt ttctatttta atacatttgt
     3121 ttaccacttg tttatgtata tgtaggtgac gttacttgag cttaaatgta ctttactgag
     3181 caaagtttaa aaaaaacaaa gtatatttta ttttatgata aagggccttt aacctcatgg
     3241 tcaaatacta atattatatt tgctgagaca agatttgaaa ttgtatcaag agttttattt
     3301 ttctgacatt taaagttcta cataataaag gtaaacttaa gtaatggtgc tacttcattt
     3361 tttaagtatt tctatataaa taaaacattg aagaaaaatc a
//
