LOCUS       NM_001398739            6260 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus mex-3 RNA binding family member A (Mex3a), mRNA.
ACCESSION   NM_001398739 XM_039103755
VERSION     NM_001398739.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6260)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Dec 22, 2021 this sequence version replaced XM_039103755.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582419.1191462.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-915               JAXUCZ010000002.1  176287900-176288814
            916-6260            JAXUCZ010000002.1  176292025-176297369
FEATURES             Location/Qualifiers
     source          1..6260
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..6260
                     /gene="Mex3a"
                     /gene_synonym="RGD1564904"
                     /note="mex-3 RNA binding family member A"
                     /db_xref="GeneID:310631"
                     /db_xref="RGD:1564904"
     exon            1..915
                     /gene="Mex3a"
                     /gene_synonym="RGD1564904"
                     /inference="alignment:Splign:2.1.0"
     CDS             462..2024
                     /gene="Mex3a"
                     /gene_synonym="RGD1564904"
                     /note="mex3 homolog A"
                     /codon_start=1
                     /product="RNA-binding protein MEX3A"
                     /protein_id="NP_001385668.1"
                     /db_xref="GeneID:310631"
                     /db_xref="RGD:1564904"
                     /translation="MPSLVVSGIMERNGGFGELGCFGGSAKDRGLLEDERALQLALDQ
                     LCLLGLGEPPAPTAGEDGGGGGGGAPAQPAAPPQPAPPPPPAAAPAAPSAAPAAQTPQ
                     PPTAPKGANDAKLCALYKEAELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRA
                     KTNTYIKTPVRGEEPVFMVTGRREDVATARREIISAAEHFSMIRASRNKSGAAFGVAP
                     ALPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGN
                     VERAREEIETHIAVRTGKILEYNSDGDFLAGSPDAALDSRYSDAWRVHAPGCKPLSTF
                     RQNSLGCIGECGVDSAFEAPRLGEQGGDFGYGGYLFPGYGVGKQDVYYGVAETSPPLW
                     AGQENATPTSVLFSSASSSSSSAKARAGPPGAHRSPATSAGPEQLTGLPRRPPGEPLQ
                     GFSKLGAGGLRSPGGGRDCMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVC
                     HITATQAIRIFS"
     exon            916..6260
                     /gene="Mex3a"
                     /gene_synonym="RGD1564904"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaaagagttt gagcgctgga aggggctggg ctctattggg ggccactgag cgacgctccg
       61 ggactggggc tcggtgcggg agcctaaggg ggcgtctgct cggcggaggg tagagactct
      121 gggtccaagg cggaggggtg ggggctaggg cccgcagccc cccaccccac cccgtcaccc
      181 cggagcgaga ggagatctgc tttcttggtt ttgcttcttt tcccccaccc ccacccgggg
      241 gctggggcga ggggagtcag gttacagggt gcttggggag gggggcttag gggtgggtct
      301 atctttctat ctcgctttct tcccccctcc ccagctcttt gttccccctc cccacacacc
      361 ccctcctctc ctctcccctc ccctcctctc tcctcttctc ccttccacca cctctctctc
      421 tctctccctc tctctctctc tcccccagct tttgtttcgc catgcctagt ctagtggtat
      481 ctggaataat ggaaagaaat gggggctttg gagaactagg atgtttcggg ggaagcgcta
      541 aggaccgagg gctgctggaa gacgagcgcg cccttcagct ggctcttgat caactctgcc
      601 tcctgggttt gggggagccc cccgccccca cggcgggcga ggacggggga ggtggggggg
      661 gcggcgcccc cgcgcagccg gccgcccccc cgcagccggc cccgccgccg ccgcccgcgg
      721 cggccccggc cgccccgagc gcggcccccg cggcgcagac gccccagccc cccaccgccc
      781 ccaaaggggc gaacgacgcc aagctctgcg cgctctacaa agaggccgag ctgcgcctga
      841 agggcagcag caacactacg gagtgcgttc ccgtgcccac ctccgagcac gtggccgaga
      901 tcgtgggcag gcaaggctgc aagattaagg cactgagagc caagaccaac acctatatca
      961 agacacctgt gcgaggtgag gagcccgtgt tcatggtcac tgggaggcgg gaagatgtgg
     1021 ccacagcccg gcgggagatc atctcagcag ctgagcattt ctccatgata agagcctcac
     1081 gcaacaagtc tggcgccgcc tttggggtgg cccctgctct gccaggccaa gtgaccatcc
     1141 gtgtaagagt gccctaccgc gtggtgggac tggtggtggg tcccaaggga gcgaccatca
     1201 aacgcatcca gcagcagacc aacacataca tcatcactcc aagccgggac cgagaccccg
     1261 tgtttgagat caccggcgcc ccaggcaacg tggagcgagc gcgggaggag atcgagacgc
     1321 acatcgctgt gcgcaccggc aagattcttg agtacaacag cgacggcgac ttcctggctg
     1381 gcagccctga cgctgccctg gacagccgct actcagacgc ctggcgggtg catgcgccag
     1441 gctgtaagcc actctccacc ttccggcaaa acagcctggg ctgcataggc gagtgcggtg
     1501 tggactcggc ctttgaggcc ccgcgcctag gcgagcaggg cggtgacttc ggctacggcg
     1561 gatatctgtt tccgggctat ggcgtgggca agcaggacgt gtactatggc gtggcggaga
     1621 caagcccccc gctgtgggcg ggccaagaga acgccacgcc cacctcggtg ctcttctcct
     1681 ctgcttcctc ctcctcttct tcagccaagg cacgagcggg tcccccaggc gcacaccgct
     1741 ctcccgccac ctctgcgggg ccagagcagc tgactgggct ccctcggagg ccgcccggag
     1801 aaccactgca gggtttctct aaactggggg caggcgggct tcggagccct ggcggtgggc
     1861 gggactgcat ggtgtgcttt gagagcgaag tgacagcagc cctggtaccc tgtggacaca
     1921 accttttctg catggagtgt gcagtacgca tctgcgagag gacggaccca gagtgtcctg
     1981 tctgccacat caccgccaca caagccatcc gaatattttc ctaagctttt tgtccctggt
     2041 ctcccaggcc cgcaccctgg ggtgccgccc tgaacctgta gggccttttg aaaaatcagt
     2101 gactacaggg caaggtgctt ggaaatattc actcgttggg gtggggaagg ggaggcttga
     2161 gtggctgggg gcggggccac tttcagagcc tctggttacc ctttgggagg gggccataag
     2221 ttttactaga gttacaactc tgatacctca acacaccctt aaatctggaa gcagctaaga
     2281 gaagcttttg tttagcctga agtggccacc aggacgtcct gacctttccc ttctccctat
     2341 ccgtgtgtca ttttgtccct tcctttggag gggtaagaac agggagaatt gccatgtgta
     2401 gctagaggtg ctcttagtga tccccagccc tctagtcctg acctcccatc tcctaacaca
     2461 accccttacc acgctccccg cctcatatcc tgagttccca acagtgtaag gagatggggg
     2521 cctattaaag atctgggtag gtcttctggg gtggaggagg gtgtcaatta agggctcaca
     2581 actcacttgt ctttcaaagc tgggctagag agatgtggaa agaggggctt ctctttccct
     2641 tccaactttt tgcttggttt tcccccaatt ttttccctct ggatctgccc tttgcttttt
     2701 tttttaactc tttttttttt tttttcctat ttcttctatt cccctttccc tccaccccag
     2761 ccagctgttg ctttctgtcc ccttgtacct cttgcctctt ctagcccagc tttggggata
     2821 tcatcttcct gggagagaag tctggagaag tttttgtagc ccccactccc agttcctctt
     2881 cttgtagtgg gcatcccttt tccccactcc tccaaagaat cggttccaat tcttgatgga
     2941 atgtagtttt agactgaatg acagtttgag acgggaaatt aataaggggg tacataatgg
     3001 aaactaatag taggggtgca taaaaggttg gaaccccacc tttatcatct atgggcatta
     3061 tacttaggga gcagttctta tcctggatct tctgcccaag ggaagggaaa gtaggaaagt
     3121 cctggggcaa gagagatgtg actggaaggg ctcccctccc cctctcctgc agtggcctac
     3181 cccctgacct ctctgcacct agctgaacca ttactgaatc cttattagcc acaaatcatg
     3241 aattctgtct tacccactgg ctgaggagag aggccagctc ttttggtgag gggccaggcc
     3301 agggcaaagc aggattgggg tgcagtggag cctgttacaa gaatcaggta ttgtgatagg
     3361 tctggcaccc ctttatgctc ctcttgctca cttgtgtctg tcagcagcct cctaccctcc
     3421 tggttccgct ggccgggcca ggagaggatg agtgaccagg agatgcttgt atatagctgg
     3481 gtgggactat tctgagccct agctcgggag gcccactctt cctggatggg gaaaggatgt
     3541 gggatgaggg cagagggagg tctctctttt gcctcttgtg aattaacttg cctctcctca
     3601 gccttcccct ccagaccacc agcctgggag gggagaggaa ggaggtcaca gcccagcaaa
     3661 ctggcctgtg gcagcttccc ttccttccac caatgtgagc catctcgaga tgtctgtaca
     3721 atagaaacca aaccaaatgg gcaccctggg ctgcccaggg gcagggaatg ggaggggggt
     3781 gggaagaagg gatgtctgtc tgtcagtccc ctccccctct ccactcctta cccacaaagg
     3841 caaaagactg ttacactagg ggctccgcag atccagtccc acccttgctg ggtgagcctt
     3901 tcctagaaac aagcgcaaag tgagtgagcg gcaaaacaaa gcaatgaggg agtgagacgg
     3961 gcgaccaaca gaggagagaa aacaaaaata gcaaaaaaag aaaaaaagca gttctttata
     4021 atttaatatt ctattttaat aaaggcattt attaccgtat aaatgtagca aagaacctgg
     4081 gctaatatga aaaaaagact ttttattagg taatttatta tatgaaaagg atattttatt
     4141 ttatgataaa gtgatcctta aaaaaacttt agaaggttta gaatatatgt agggagagaa
     4201 gaaaaaaata catttgtatt cagagttaaa tcttaaaaaa agtttttaat atatgttcgg
     4261 gtttatgttc tttttttttt cccccacttt tttttgggga gaaatgtcat ttgcttttct
     4321 tgggggagca tcctgggatg gagggtggag cggggatggg gagttggtcc cttctggggc
     4381 ccccaccagt agattggatt tcactctgtg ggctcccctc cccctccccc tcagggggag
     4441 ccggcagagc aaaacaaagg aagggattaa ccagaaagga agaagctttg ggactaagga
     4501 ctgagggtcc tggagtgtcc ctccttcccc taccctgtgc caggggcagt caggagggaa
     4561 aagccagaac tgaggcctaa caggcctatg gaaaccctca gaggtgtgag atttaagaga
     4621 aatagatttt ttttaaccaa aaaaagtttt aagaaaaaaa atgagaagag aaagaaaaac
     4681 cgaggggttt aaaagaagag aatactacaa aataattcaa atttatttca tataatccta
     4741 gaaaaaggaa aagaattact agttacttag tagatgatac tcagaatagc ttaaagttta
     4801 gtagcattgt gggcccctga gcccagtaga atgtataaaa gtatgggaaa gagaaaagaa
     4861 tagaggccag tggctgctgc cctacccctg gggccagggc tagagcaggc tgctagctag
     4921 gattgggagc ttccagtctg ctggggttga ttctgagaat ccttaggttt aagtgcggga
     4981 caagtacatg aggggctctg tcccagggtc tttgcaaggg tacacactgg tcaccggaag
     5041 ctccacgagg ctgggctgag atcctggcca tctgttagga aacccctact cctaatgccc
     5101 aaccctccca gcctctccca ggccaccctg aggaagtcct tgaagtcagc tcggtccttc
     5161 tccctacagg tgggttcccg agccaggtgt agctagctgt tctttctgtg aatgagccag
     5221 caacttcttg tcagcccaga ctccagcacc ctgctgtgtg ggagtgccat tgcagtttct
     5281 agtgctgttt ttcttcacat ctatagtggg gtgttttggg gttttttttt ttgttgttgt
     5341 tgttgttcat ttgttatttt tttgacacag ggtctctagt tcagtctggc cttaaacaag
     5401 cagccatctt cttgctgcct ccagttgctg ggactataaa gaatgcaccg ctattcctgg
     5461 ctttgtggag tctcagagaa gttaacatcc caaggaagac ttcctacttg ggaagtatag
     5521 tgcaagtatt gtccttacgg gtctggggga actcccccac tccaccccta agaacagata
     5581 aagtgtgcag ggaacttggg tgaccctctg tgcaaccctt gtgttcggat aggaatcacg
     5641 catagggcca cataaccttc cccacagaaa gccgggagcc tggctttcgc atgtgagaaa
     5701 taggcatttt taagcacttg ccttccatca cccctagcta gcaatgagat caggattggg
     5761 agaggcctct tggctttagc ttgattgagc agtataccag tgattgacat gccacttcat
     5821 gaccctagag cccacacaca tctccctctc cccaaattac tcttctcacc ccatctagag
     5881 actagaagtt cccctgccct ttttgcccaa ggccctcggt agttttttga gatggtagca
     5941 cctgggaatg gggagaatgt cccctagcaa tcctgagggt gagtggttgg gtagagacag
     6001 ccccggggca gggaagatgg tctctccact gtagaaagta gagtaggatc gtggtcagac
     6061 ttaatttgag gcatcaagtg actcgtacaa atcaccaagg aagattccaa atgcagagta
     6121 aaggtgggaa atgaaacaga cccatgagta atcaagtcaa agtgaagttg cacacaatgc
     6181 agagaaacca agaaggggga gggttaatgt attaaatgtg ctatggagaa gttaatttta
     6241 ttaaaagtat tattacttaa
//
