LOCUS       NM_001163164            1456 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus methyltransferase 9, His-X-His N1(pi)-histidine
            (Mettl9), mRNA.
ACCESSION   NM_001163164
VERSION     NM_001163164.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Huang,C., Sun,L., Xiao,C., You,W., Sun,L., Wang,S., Zhang,Z. and
            Liu,S.
  TITLE     Circular RNA METTL9 contributes to neuroinflammation following
            traumatic brain injury by complexing with astrocytic SND1
  JOURNAL   J Neuroinflammation 20 (1), 39 (2023)
   PUBMED   36803376
  REMARK    GeneRIF: Circular RNA METTL9 contributes to neuroinflammation
            following traumatic brain injury by complexing with astrocytic
            SND1.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: HQ898855.1, SRR26360172.627518.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-165               JAXUCZ010000001.1  185009316-185009480
            166-356             JAXUCZ010000001.1  185025295-185025485
            357-566             JAXUCZ010000001.1  185029580-185029789
            567-751             JAXUCZ010000001.1  185035298-185035482
            752-1456            JAXUCZ010000001.1  185053655-185054359
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q36"
     gene            1..1456
                     /gene="Mettl9"
                     /note="methyltransferase 9, His-X-His N1(pi)-histidine"
                     /db_xref="GeneID:100302453"
                     /db_xref="RGD:2311609"
     CDS             1..957
                     /gene="Mettl9"
                     /note="methyltransferase-like protein 9; methyltransferase
                     like 9; methyltransferase 9, His-X-His N1-histidine"
                     /codon_start=1
                     /product="protein-L-histidine N-pros-methyltransferase"
                     /protein_id="NP_001156636.1"
                     /db_xref="GeneID:100302453"
                     /db_xref="RGD:2311609"
                     /translation="MRLLAGWLCLSLASVWLARRMWTLRSPLSRSLYVNMTSGPGGPA
                     AATGGGKDTHQWYVCNREKLCESLQSVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHS
                     FVSSVFSLFMSRTSINGLLGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVT
                     KIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQP
                     LTLLKDIRSVLEPTQGRVILALVLPFHPYVENVGGKWEKPSEILEIKGQNWEEQVNSL
                     PEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAVFVLRPV"
     exon            1..165
                     /gene="Mettl9"
                     /inference="alignment:Splign:2.1.0"
     exon            166..356
                     /gene="Mettl9"
                     /inference="alignment:Splign:2.1.0"
     exon            357..566
                     /gene="Mettl9"
                     /inference="alignment:Splign:2.1.0"
     exon            567..751
                     /gene="Mettl9"
                     /inference="alignment:Splign:2.1.0"
     exon            752..1456
                     /gene="Mettl9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgagactgt tggcgggctg gctgtgcctg agcctggcgt ccgtgtggct ggcgcggagg
       61 atgtggacgc tgcggagccc gctctcccgc tctctgtacg tgaacatgac tagcggccct
      121 ggcgggccag cggcggccac gggcggcggg aaggacacgc accagtggta tgtgtgcaac
      181 agagagaaat tatgcgaatc acttcagtct gtctttgttc agagttatct tgaccaagga
      241 acacagatct tcttaaacaa cagcattgag aaatctggct ggctatttat ccaactctat
      301 cattcttttg tatcatctgt ttttagcctg tttatgtcta gaacatctat taacgggttg
      361 ctaggaagag gctccatgtt tgtgttctca ccagatcagt ttcagagact gcttaaaatt
      421 aatccggact ggaaaaccca tagacttctt gatttaggtg ctggagatgg agaagtcacg
      481 aaaatcatga gccctcattt tgaagaaatt tatgccactg aactttctga aacaatgatc
      541 tggcagctcc agaagaagaa atacagagtg cttggtataa atgaatggca gaatacaggg
      601 ttccagtatg atgtcatcag ctgcttaaat ctgctggatc gctgtgatca gcctctgaca
      661 ttgttaaaag atatcagaag tgtcttggag cccacccaag gcagggtcat cctggccttg
      721 gttttgccct ttcatcccta tgtggaaaac gtaggtggca agtgggagaa accatcagaa
      781 attctggaaa tcaagggaca gaattgggaa gagcaagtga atagcctgcc tgaggtgttc
      841 aggaaagctg gctttgtcat cgaagctttc actagactgc catacctgtg tgaaggtgac
      901 atgtacaatg actactatgt tctggacgac gctgtctttg ttctcagacc agtgtaaaca
      961 tgtggaggcc caagtcttca gagtcacccc tggaatctgc cctccagaag aggaggtgca
     1021 tccagtgatg tgagggggac ctctggggac tgtcattctc agtatcatgt aggaatttaa
     1081 aaagccaaaa tactaattct ttctttgtag tgtgtaaggg agtgttttta aaaacaaaac
     1141 ccaactcttt gtgtattttt aatcaattct ttactcagaa tcacgctcca atgcaggtca
     1201 ctctccaatt atgatggaag atatttttta tacttaattg ctgtagggac tcattcccag
     1261 acaaagcaat agtcatgatg tcatggaacc gataaatgga ttgtttttaa taaatgaagt
     1321 ctggcaataa agctgtccat tcaattccaa atattggtta taaagtagaa ccattgatac
     1381 tttcatgttt agaaactcct tctcttacta ttcaaaaaat gtttttaatc atgctaataa
     1441 atgtttttgg aaatga
//
