LOCUS       NM_001109499             820 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus methyltransferase like 27 (Mettl27), mRNA.
ACCESSION   NM_001109499 XM_001066820 XM_039089762
VERSION     NM_001109499.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On or before Mar 5, 2021 this sequence version replaced
            XM_039089762.1, NM_001109499.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887621.187891.1,
                                           SRR21887621.187887.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676785 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-46                JAXUCZ010000012.1  27403157-27403202   c
            47-170              JAXUCZ010000012.1  27402719-27402842   c
            171-299             JAXUCZ010000012.1  27402097-27402225   c
            300-435             JAXUCZ010000012.1  27401427-27401562   c
            436-528             JAXUCZ010000012.1  27399425-27399517   c
            529-820             JAXUCZ010000012.1  27394290-27394581   c
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q12"
     gene            1..820
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /note="methyltransferase like 27"
                     /db_xref="GeneID:688407"
                     /db_xref="RGD:1588881"
     exon            1..46
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /inference="alignment:Splign:2.1.0"
     exon            47..170
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /inference="alignment:Splign:2.1.0"
     CDS             48..809
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /note="Williams-Beuren syndrome chromosomal region 27
                     protein; Williams Beuren syndrome chromosome region 27"
                     /codon_start=1
                     /product="methyltransferase-like protein 27"
                     /protein_id="NP_001102969.1"
                     /db_xref="GeneID:688407"
                     /db_xref="RGD:1588881"
                     /translation="MAQEEAGRLPQVLARVGTSHGITDLACKLRFYDDWAPEYDQDVA
                     ALKYRAPRLAVDCLSQALQGPPHDALILDVACGTGLVAVELQARGFLQVQGVDGSPEM
                     LKQARARGLYHHLSLCTLGQEPLPYPKGTFDAVIIVGALSEGQVPCSAIPELLRVTKP
                     GGLVCLTTRTNPSNLPYKEALEAALDSLEQAGAWERLVTQPVDHWELATSEQESGLAT
                     CANDGFISGVIYLYRKQETAQGERGRLSIQPLIDH"
     exon            171..299
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /inference="alignment:Splign:2.1.0"
     exon            300..435
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /inference="alignment:Splign:2.1.0"
     exon            436..528
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /inference="alignment:Splign:2.1.0"
     exon            529..820
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccctccact tcccgcacct ctgcctggag aagcaggctc cgtagggatg gctcaggagg
       61 aggccgggag gctgccccaa gtactggccc gggtggggac ctcccacggt atcaccgacc
      121 tggcctgcaa gctccgcttc tatgacgact gggctccgga gtatgaccag gatgtggctg
      181 ctttgaagta tcgagcccca cgccttgctg tggattgtct cagtcaagcc cttcagggcc
      241 caccccatga tgccctgatc ctggatgtgg cctgtggcac tggcctggta gctgtggagc
      301 tacaggctcg gggcttcctt caggtgcagg gggtggacgg aagcccagaa atgctgaagc
      361 aggcccgagc ccgtggcctg taccaccacc ttagcctctg taccctgggc caggagccgc
      421 tgccctaccc taaagggacc tttgacgccg tgatcattgt gggcgctctc agtgagggac
      481 aggtgccctg cagtgccata cctgagctcc taagagtcac caagccgggt ggacttgttt
      541 gtctgactac caggaccaac ccttccaacc ttccatacaa ggaggcgctg gaagccgcct
      601 tagactccct ggagcaggct ggagcgtggg aacgcctggt gacccagcct gtggaccact
      661 gggagctagc aacttcagaa caagagtcag ggctggccac ctgtgccaac gatggcttca
      721 tctctggcgt catctacctt taccgaaagc aggagacagc ccagggtgag agagggaggc
      781 tcagtatcca gcccctaatt gaccactgat cctctatgta
//
