LOCUS       NM_001014173            2034 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus methyltransferase like 25B (Mettl25b), mRNA.
ACCESSION   NM_001014173 XM_342272
VERSION     NM_001014173.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001014173.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079059.1, SRR26643293.12762.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-419               JAXUCZ010000002.1  175694719-175695137 c
            420-542             JAXUCZ010000002.1  175694134-175694256 c
            543-667             JAXUCZ010000002.1  175690611-175690735 c
            668-860             JAXUCZ010000002.1  175690246-175690438 c
            861-923             JAXUCZ010000002.1  175689731-175689793 c
            924-1067            JAXUCZ010000002.1  175689373-175689516 c
            1068-1552           JAXUCZ010000002.1  175688271-175688755 c
            1553-1737           JAXUCZ010000002.1  175687649-175687833 c
            1738-2034           JAXUCZ010000002.1  175686539-175686835 c
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..2034
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /note="methyltransferase like 25B"
                     /db_xref="GeneID:361976"
                     /db_xref="RGD:1311265"
     exon            1..419
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
     exon            420..542
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
     CDS             432..1859
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /note="protein RRNAD1; ribosomal RNA adenine dimethylase
                     domain containing 1"
                     /codon_start=1
                     /product="methyltransferase-like protein 25B"
                     /protein_id="NP_001014195.1"
                     /db_xref="GeneID:361976"
                     /db_xref="RGD:1311265"
                     /translation="MPGVSAHGLSCEERRQLAVDLTRVLALYRSILDAYIIEFFTDSL
                     WGTLPHAWQEVLDGLNPPELATLLLGMPREGEEIRYRSVWPLTLLALKSTACALAFTR
                     TPGFHTPSEFLENPSQSSRLTAPFRKHVKPKKQHEIRRLGELVKKLSDLTGCTQVVDV
                     GSGQGHLSRFMSLGLGLMVKSLEGNKRLVARAQRLDQELLQALDKMEKRHPKMVQRSP
                     RHRPHHVVQWVSPTTLCEELLLPLEMPGQSSTRLLLTGLHACGDLSVALLRHFCCCPE
                     VVALASVGCCYMKLSDPGSYPLSQWVAGLPGHELPYRLREGACHALEDYAERLQKAGP
                     GLQTHCFRAALEAVIRQVCPELRRPGVQGIPRVHELKIEEYVQQGLQRVGLDPQLPLD
                     QAALQAHQAQENRVVAFFSLALLLAPLVETLILLDRMLYLQEQGFYAELLPIFSPELS
                     PRNLVLVATKTPLGQAFSILETEDS"
     exon            543..667
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
     exon            668..860
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
     exon            861..923
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
     exon            924..1067
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1552
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
     exon            1553..1737
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
     exon            1738..2034
                     /gene="Mettl25b"
                     /gene_synonym="RGD1311265; Rrnad1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaaacttcta agaacatttg ccagtcctga gatgtcctcc ggatcaccca ggaatcctca
       61 acgtgctaca aaatgaagag caaatccagg tatcgctctc cctaggctcc acgtggagga
      121 gcgatctacc ttgcctggcc ccaacataag aacctgtgac accacacagc agaggatcta
      181 agtggaggag gatccagaca ggacacctcc gccactgttg acggtccccc aaccatcccc
      241 gaacacctat atacctacct ccaagttagg tcccactaaa atcgcaagcg tccggagccg
      301 gatgcaggcg cgcgtcgacg tatgcccgga cggcaagaac gcgggcggca acgggaaggc
      361 ggccggcgca cacgcgcccg cagcgccccc acctcaggca gcgaggccag ggactcggat
      421 caagccacag gatgccgggc gtctcagccc atggcctctc gtgtgaggag agaaggcaac
      481 tggctgtgga cctcacccgc gtcctagctc tctaccgttc catcctggac gcctacatta
      541 tcgaattttt cacggacagc ctgtggggca cactccccca cgcatggcaa gaagtgctgg
      601 acggactgaa cccaccagag ctggccaccc tgttgctggg gatgcccagg gaaggggagg
      661 agatcaggta caggtctgtg tggccactca ccctgctggc cctgaagtcc acagcttgtg
      721 ccctcgcctt tacccggaca cctggctttc acactccatc agagttcctg gagaacccca
      781 gccagagctc ccggctaaca gctccttttc ggaaacatgt caagcccaag aagcagcatg
      841 agatccggag gctgggagag ttggtgaaga agcttagtga tcttactggc tgcacccaag
      901 ttgtggatgt gggctcaggc cagggccacc tctctcgctt catgtctctg gggcttgggc
      961 tgatggtgaa gagccttgaa ggaaataaga ggctagtagc gagagctcag cgtctagacc
     1021 aggagctcct gcaggctctg gacaaaatgg agaagaggca cccaaagatg gtgcaaagaa
     1081 gccctcgcca ccgcccccac cacgtggttc agtgggtcag ccccacaact ctgtgtgagg
     1141 agcttctgct tcctctggag atgccaggcc agagtagtac ccgtctgcta ctcacaggcc
     1201 ttcatgcctg tggggatctt agtgttgcct tactgagaca cttctgctgc tgtcctgaag
     1261 tggtggccct ggcttcggtg ggctgctgct acatgaaact cagtgaccct ggcagctacc
     1321 cactaagtca gtgggtagct gggctgcctg gccatgaact accctacagg ctccgggagg
     1381 gtgcctgcca tgctctagag gactatgcgg agagattaca gaaagcaggg cctggcctac
     1441 aaacacattg cttccgtgca gcgctggagg cagtcatccg acaagtctgc cctgagcttc
     1501 ggaggcctgg tgtgcaagga attcccaggg tccatgaact caagattgaa gaatatgtgc
     1561 aacaagggtt acagcgagtg ggtctggacc cccagctgcc attggatcag gctgccctcc
     1621 aggcccacca ggcccaagag aatcgtgtgg tggccttctt cagcttggcc ctcttgctgg
     1681 ccccactggt agagacattg attctgctgg accggatgct ctatcttcaa gagcaaggct
     1741 tctatgctga gctgttgccc atcttcagcc ctgaactgtc tcccagaaat ctggttctgg
     1801 tggcaaccaa gacgcccctg ggtcaggcct tctccattct tgagactgaa gacagctgac
     1861 agtctgaagc caccaggtgt cagtatggct agctgccgtc cttggcaccc tttagagtgc
     1921 cctgtatcct gctgggattc tggctctttg cagacttcag atttgtaccc tttctttccc
     1981 ttcacttgga aagtaatact gtggaatttt tatttataaa acttttaaga ctta
//
