LOCUS       XM_039079853            2003 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus methionyl aminopeptidase 2 (Metap2),
            transcript variant X2, mRNA.
ACCESSION   XM_039079853
VERSION     XM_039079853.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039079853.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2003
                     /gene="Metap2"
                     /gene_synonym="Amp2; Mnpep; p67"
                     /note="methionyl aminopeptidase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 79
                     ESTs, 33 long SRA reads, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 243 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:64370"
                     /db_xref="RGD:70995"
     CDS             137..1570
                     /gene="Metap2"
                     /gene_synonym="Amp2; Mnpep; p67"
                     /codon_start=1
                     /product="methionine aminopeptidase 2 isoform X2"
                     /protein_id="XP_038935781.1"
                     /db_xref="GeneID:64370"
                     /db_xref="RGD:70995"
                     /translation="MAGVEEASSFGGHLNGDLDPDDREEGTSSTAEEAAKKKRRKKKK
                     GKGAVSGQQELDKESGTSVDEVAKQLERQALEEKEKDDDDEDGDGDGDGAAGKKKKKK
                     KKKRGPRVQTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQA
                     SEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAF
                     PTGCSLNNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNPKYDILL
                     KAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGP
                     YRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVP
                     IRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIK
                     GSYTAQFEHTILLRPTCKEVVSRGDDY"
ORIGIN      
        1 ccctgcgccc cgaccatcga gcgcggcttc cggcgtcgct ggtggaggtg ggtgaagaag
       61 gagcgggccc tcgccgctcg ttctcgctcc ctctttctct ctctcttctt ctctctctct
      121 ttccctctcg ggcaacatgg cgggcgtgga agaggcatcg tctttcgggg gccacctgaa
      181 tggcgacctg gatccagacg acagggaaga gggaacctcc agcacggccg aggaagccgc
      241 caagaagaaa agacggaaga agaagaaggg caaaggggct gtgtcagggc aacaagaact
      301 tgataaagaa tcgggaacct cagtggacga agtagcaaaa cagttggaga gacaagcact
      361 ggaggagaaa gagaaagatg atgacgatga agatggagat ggtgatggtg atggtgcagc
      421 tgggaagaag aagaaaaaga agaagaagaa gagaggacca agagttcaaa cagaccctcc
      481 ctcagttcca atatgtgacc tgtatcctaa tggtgtattt cccaaaggac aagagtgtga
      541 atacccaccc acccaagatg ggcggacagc tgcttggaga accacaagtg aagagaaaaa
      601 ggcgctagac caggctagtg aggagatttg gaacgacttc cgagaagctg ccgaagcaca
      661 ccggcaagtt aggaaatacg tcatgagctg gatcaagcct gggatgacaa tgatagaaat
      721 atgtgagaag ttggaagact gttcccgaaa gctcataaag gagaatgggt taaatgcagg
      781 cctggccttt cccactgggt gttctctcaa caactgtgct gcacattaca ctcccaatgc
      841 tggtgacacg acagtcttac agtacgacga catctgtaag atcgactttg gaacgcatat
      901 aagtggtaga ataattgatt gtgcttttac tgttactttt aatcccaaat atgacatatt
      961 attaaaagct gtaaaagatg ccaccaatac tggaataaag tgtgcgggga ttgacgtccg
     1021 tctctgtgat gtcggcgagg ccattcaaga agttatggag tcctatgaag tggaaataga
     1081 tgggaagacc taccaagtga aacccatacg taacttaaat ggacattcaa ttgggccata
     1141 tagaattcat gctggaaaaa cagtgcccat tgtgaaagga ggggaagcta caaggatgga
     1201 ggaaggagag gtgtatgcca ttgagacctt tggtagcaca gggaagggcg tggttcatga
     1261 cgatatggaa tgttcacact acatgaaaaa ttttgatgtg ggacacgtgc caataaggct
     1321 tccaagaaca aaacacttgt tgaatgtcat caatgaaaac tttggtaccc ttgccttctg
     1381 ccgaaggtgg ctggatcgct tgggagaaag taaatactta atggctctga agaacctgtg
     1441 tgacttgggc attgtagatc catatccacc actctgtgac attaaaggat catacacagc
     1501 acagtttgaa cataccatac tgctgcgccc aacctgtaaa gaagttgtca gcagaggaga
     1561 tgactattaa aacttagtcc aaagccaact caacgtcttt attttctaag ctttgttgga
     1621 acacattata ccacaagtaa tttgcaacat gtctgtttta acagtggacc tgtgtaatgc
     1681 cgttatccat gtttaaagga gtttgatcaa agccaaactg tctacatgta attaaccaag
     1741 gaaaaggctt tcaagacttt actgttaact gtttctcccg tctaggaaat gctgtactgc
     1801 tcactagtta ggaattactt aaacgttttg ttttgaagac ctaagagatg ctttttggat
     1861 atttatattg ccatattctt acttggatgc tttgaatgac tacatacatc cagttctgca
     1921 cctatgccct ctggtattgc tttttaacct tcctggaatc cattttctaa aaaataaaga
     1981 cattttcaga tctgagagcc aca
//
