LOCUS       NM_001107812            1358 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus methionyl aminopeptidase type 1D (mitochondrial)
            (Metap1d), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001107812 XM_001059115 XM_230988
VERSION     NM_001107812.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Serero A, Giglione C, Sardini A, Martinez-Sanz J and Meinnel T.
  TITLE     An unusual peptide deformylase features in the human mitochondrial
            N-terminal methionine excision pathway
  JOURNAL   J Biol Chem 278 (52), 52953-52963 (2003)
   PUBMED   14532271
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DY575699.1 and BC167092.1.
            
            On May 30, 2008 this sequence version replaced NM_001107812.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC167092.1, SRR8487230.2166.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132274, SAMD00132291
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-73                DY575699.1         28-100
            74-1358             BC167092.1         1-1285
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q23"
     gene            1..1358
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /note="methionyl aminopeptidase type 1D (mitochondrial)"
                     /db_xref="GeneID:311748"
                     /db_xref="RGD:1307413"
     exon            1..106
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..1071
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /EC_number="3.4.11.18"
                     /note="methionine aminopeptidase-like 1"
                     /codon_start=1
                     /product="methionine aminopeptidase 1D, mitochondrial"
                     /protein_id="NP_001101282.2"
                     /db_xref="GeneID:311748"
                     /db_xref="RGD:1307413"
                     /translation="MAAPIGVHLLVRGGCQRILSSPLHHLFLHKRAGSQQRRYFFWRQ
                     RDISHSVVSPAAVSPAHPVPEHIKKPDYVTTGIVPDWGDSIEVKNEDQIQGLREACRL
                     ARHVLLLAGKSLKVGMTTEEIDALVHREIIRRDAYPSPLGYGRFPKSVCTSVNNVLCH
                     GIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDESGTKLVEVARACRDEAIA
                     ACRAGAPFSVIGNTISHITRQNGLQVCPHFVGHGIGSYFHGHPEIWHHANDNDLPMEE
                     RMAFTIEPIITEGSPEFKVLEDAWTVVSLDNRRSAQFEHTVLITPRGVEILTKVPQEA
                     "
     exon            107..261
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     exon            262..411
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     exon            412..560
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     exon            561..603
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     exon            604..767
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     exon            768..865
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     exon            866..913
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     exon            914..992
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
     exon            993..1335
                     /gene="Metap1d"
                     /gene_synonym="Map1d; Metapl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagagcgctg ctactccagt gggcggggct acgaggcact ctcccggcca cgtgaccgga
       61 gccaacatgg cggcgcccat cggcgtccac ctgctcgtcc gtggaggttg tcagagaatt
      121 ctgtcttcac cactccatca tctcttctta cacaagcggg caggcagtca acaaagaaga
      181 tatttcttct ggagacaaag ggatatctcc cacagtgtgg tttcgccggc tgcagtctct
      241 cccgcacatc ctgtccccga gcacataaag aagccagact atgtgacgac aggcattgtg
      301 cccgactggg gagacagcat agaagttaaa aatgaagatc agattcaagg gcttcgtgag
      361 gcttgtcggc tggcgcggca cgtcctcctc ctggctggga agagtttaaa ggttggcatg
      421 acaactgaag agatagatgc actagttcac cgggaaatca tcaggcgtga cgcatatccc
      481 tcacctctgg gctatggccg ctttccaaaa tctgtctgca cctctgtaaa caatgtgctc
      541 tgtcatggca ttcctgacag ccgacctctt caggatggag atattatcaa cattgatgtc
      601 acggtctatt acaatggcta ccatggagac acctccgaaa cctttctggt gggcaatgtg
      661 gatgaaagtg gtacaaagtt agtggaggtt gccagggcgt gtagagacga agcaatcgca
      721 gcctgcagag ctggggcccc cttctctgta attggaaaca caatcagcca cataactcgt
      781 cagaatggtt tgcaagtctg tccacatttt gtgggacacg ggataggatc gtactttcat
      841 ggacatcctg aaatttggca tcatgcaaat gacaacgatc tgcccatgga ggagcgcatg
      901 gctttcacca ttgagccaat catcactgaa ggttccccgg aatttaaagt cctggaggac
      961 gcgtggaccg tggtctcact agacaaccga aggtccgcac agttcgagca cacagtcctc
     1021 atcacgccaa ggggtgttga gatactcact aaagtgccac aggaagcctg agatcggcca
     1081 gaaggccacc cagatccagc tccttttttc ttaaagagac cttcgaggac tgaggagcca
     1141 accccaggcc acagagaaag aagcctgcgg tgtctagaag aagaaagtag tgaggacagg
     1201 ctttggggac acaggtccta caggacagac cttggggcta gaaaaacaca cctccctttc
     1261 tgggcaggtg gtttgtcctt ttcctgtcta tattctgccc aagaagttta aaaaaacaaa
     1321 acaaaaactc tcaaaaaaaa aaaaaaaaaa aaaaaaaa
//
